PDB entry 2yzk

View 2yzk on RCSB PDB site
Description: Crystal structure of orotate phosphoribosyltransferase from Aeropyrum pernix
Deposited on 2007-05-06, released 2007-11-06
The last revision was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.23
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: orotate phosphoribosyltransferase
    Species: Aeropyrum pernix [TaxId:56636]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y9D8 (1-End)
      • initiating methionine (0)
  • Chain 'B':
    Compound: orotate phosphoribosyltransferase
    Species: Aeropyrum pernix [TaxId:56636]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y9D8 (1-End)
      • initiating methionine (0)
  • Chain 'C':
    Compound: orotate phosphoribosyltransferase
    Species: Aeropyrum pernix [TaxId:56636]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y9D8 (1-End)
      • initiating methionine (0)
  • Chain 'D':
    Compound: orotate phosphoribosyltransferase
    Species: Aeropyrum pernix [TaxId:56636]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9Y9D8 (1-End)
      • initiating methionine (0)
  • Heterogens: PO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2yzkA (A:)
mlakvlkkrgavlrgdfvlssgrrssvyidmrrllgdessysvaldlllevggqdlarss
avigvatgglpwaamlalrlskplgyvrperkghgtlsqvegdppkgrvvvvddvattgt
siaksievlrsngytvgtalvlvdrgegagellarmgvrlvsvatlktileklgwgge

    Sequence, based on observed residues (ATOM records):
    >2yzkA (A:)
mlakvlkkrgavlrgdfvlssgrrssvyidmrrllgdessysvaldlllevggqdlarss
avigvatgglpwaamlalrlskplgyvrperkghgtlsqvegdppkgrvvvvddvattgt
siaksievlrsngytvgtalvlvdrgegagellarmgvrlvsvatlktileklgwgg

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2yzkB (B:)
mlakvlkkrgavlrgdfvlssgrrssvyidmrrllgdessysvaldlllevggqdlarss
avigvatgglpwaamlalrlskplgyvrperkghgtlsqvegdppkgrvvvvddvattgt
siaksievlrsngytvgtalvlvdrgegagellarmgvrlvsvatlktileklgwgge

    Sequence, based on observed residues (ATOM records):
    >2yzkB (B:)
mlakvlkkrgavlrgdfvlssgrrssvyidmrrllgdessysvaldlllevggqdlarss
avigvatgglpwaamlalrlskplgyvrpsqvegdppkgrvvvvddvattgtsiaksiev
lrsngytvgtalvlvdrgegagellarmgvrlvsvatlktileklgw

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2yzkC (C:)
mlakvlkkrgavlrgdfvlssgrrssvyidmrrllgdessysvaldlllevggqdlarss
avigvatgglpwaamlalrlskplgyvrperkghgtlsqvegdppkgrvvvvddvattgt
siaksievlrsngytvgtalvlvdrgegagellarmgvrlvsvatlktileklgwgge

    Sequence, based on observed residues (ATOM records):
    >2yzkC (C:)
mlakvlkkrgavlrgdfvlssgrrssvyidmrrllgdessysvaldlllevggqdlarss
avigvatgglpwaamlalrlskplgyvrsqvegdppkgrvvvvddvattgtsiaksievl
rsngytvgtalvlvdrgegagellarmgvrlvsvatlktileklgw

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2yzkD (D:)
mlakvlkkrgavlrgdfvlssgrrssvyidmrrllgdessysvaldlllevggqdlarss
avigvatgglpwaamlalrlskplgyvrperkghgtlsqvegdppkgrvvvvddvattgt
siaksievlrsngytvgtalvlvdrgegagellarmgvrlvsvatlktileklgwgge

    Sequence, based on observed residues (ATOM records):
    >2yzkD (D:)
mlakvlkkrgavlrgdfvlssgrrssvyidmrrllgdessysvaldlllevggqdlarss
avigvatgglpwaamlalrlskplgyvrperkghgtlsqvegdppkgrvvvvddvattgt
siaksievlrsngytvgtalvlvdrgegagellarmgvrlvsvatlktileklgwgg