PDB entry 2yzh

View 2yzh on RCSB PDB site
Description: Crystal structure of peroxiredoxin-like protein from Aquifex aeolicus
Class: Oxidoreductase
Keywords: Redox protein, Antioxidant, Oxidoreductase, Peroxidase, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI
Deposited on 2007-05-05, released 2007-11-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: 0.192
AEROSPACI score: 0.5 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Probable thiol peroxidase
    Species: Aquifex aeolicus [TaxId:224324]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O66780 (2-End)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d2yzha1, d2yzha2
  • Chain 'B':
    Compound: Probable thiol peroxidase
    Species: Aquifex aeolicus [TaxId:224324]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O66780 (2-End)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d2yzhb1, d2yzhb2
  • Chain 'C':
    Compound: Probable thiol peroxidase
    Species: Aquifex aeolicus [TaxId:224324]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O66780 (2-End)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d2yzhc1, d2yzhc2
  • Chain 'D':
    Compound: Probable thiol peroxidase
    Species: Aquifex aeolicus [TaxId:224324]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O66780 (2-170)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d2yzhd1, d2yzhd2
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2yzhA (A:)
ghmartvnlkgnpvtlvgpelkvgdrapeavvvtkdlqekivggakdvvqviitvpsldt
pvcetetkkfneimagmegvdvtvvsmdlpfaqkrfcesfniqnvtvasdfryrdmekyg
vligegalkgilaravfiidkegkvayvqlvpeiteepnydevvnkvkeli

    Sequence, based on observed residues (ATOM records): (download) 
    >2yzhA (A:)
ghmartvnlkgnpvtlvgpelkvgdrapeavvvtkdlqekivggakdvvqviitvpsldt
pvcetetkkfneimagmegvdvtvvsmdlpfaqkrfcesfniqnvtvasdfryrdmekyg
vligegalkgilaravfiidkegkvayvqlvpeiteepnydevvnkvkel

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2yzhB (B:)
ghmartvnlkgnpvtlvgpelkvgdrapeavvvtkdlqekivggakdvvqviitvpsldt
pvcetetkkfneimagmegvdvtvvsmdlpfaqkrfcesfniqnvtvasdfryrdmekyg
vligegalkgilaravfiidkegkvayvqlvpeiteepnydevvnkvkeli

    Sequence, based on observed residues (ATOM records): (download) 
    >2yzhB (B:)
ghmartvnlkgnpvtlvgpelkvgdrapeavvvtkdlqekivggakdvvqviitvpsldt
pvcetetkkfneimagmegvdvtvvsmdlpfaqkrfcesfniqnvtvasdfryrdmekyg
vligegalkgilaravfiidkegkvayvqlvpeiteepnydevvnkvkel

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2yzhC (C:)
ghmartvnlkgnpvtlvgpelkvgdrapeavvvtkdlqekivggakdvvqviitvpsldt
pvcetetkkfneimagmegvdvtvvsmdlpfaqkrfcesfniqnvtvasdfryrdmekyg
vligegalkgilaravfiidkegkvayvqlvpeiteepnydevvnkvkeli

    Sequence, based on observed residues (ATOM records): (download) 
    >2yzhC (C:)
ghmartvnlkgnpvtlvgpelkvgdrapeavvvtkdlqekivggakdvvqviitvpsldt
pvcetetkkfneimagmegvdvtvvsmdlpfaqkrfcesfniqnvtvasdfryrdmekyg
vligegalkgilaravfiidkegkvayvqlvpeiteepnydevvnkvkel

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2yzhD (D:)
ghmartvnlkgnpvtlvgpelkvgdrapeavvvtkdlqekivggakdvvqviitvpsldt
pvcetetkkfneimagmegvdvtvvsmdlpfaqkrfcesfniqnvtvasdfryrdmekyg
vligegalkgilaravfiidkegkvayvqlvpeiteepnydevvnkvkeli