PDB entry 2yze

View 2yze on RCSB PDB site
Description: Crystal structure of uricase from Arthrobacter globiformis
Class: oxidoreductase
Keywords: uricase, oxidoreductase
Deposited on 2007-05-05, released 2008-05-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 1.99 Å
R-factor: 0.191
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZE
    Domains in SCOPe 2.08: d2yzea1, d2yzea2
  • Chain 'B':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZE
    Domains in SCOPe 2.08: d2yzeb1, d2yzeb2
  • Chain 'C':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZE
    Domains in SCOPe 2.08: d2yzec1, d2yzec2
  • Chain 'D':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZE
    Domains in SCOPe 2.08: d2yzed1, d2yzed2
  • Chain 'E':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZE
    Domains in SCOPe 2.08: d2yzee1, d2yzee2
  • Chain 'F':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZE
    Domains in SCOPe 2.08: d2yzef1, d2yzef2
  • Chain 'G':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZE
    Domains in SCOPe 2.08: d2yzeg1, d2yzeg2
  • Chain 'H':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZE
    Domains in SCOPe 2.08: d2yzeh1, d2yzeh2
  • Heterogens: NOB, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2yzeA (A:)
    mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
    nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
    hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
    ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
    deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
    fc
    

    Sequence, based on observed residues (ATOM records): (download)
    >2yzeA (A:)
    tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
    kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
    evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
    ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
    hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2yzeB (B:)
    mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
    nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
    hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
    ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
    deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
    fc
    

    Sequence, based on observed residues (ATOM records): (download)
    >2yzeB (B:)
    tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
    kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
    evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
    ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
    hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >2yzeC (C:)
    mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
    nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
    hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
    ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
    deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
    fc
    

    Sequence, based on observed residues (ATOM records): (download)
    >2yzeC (C:)
    tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
    kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
    evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
    ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
    hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >2yzeD (D:)
    mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
    nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
    hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
    ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
    deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
    fc
    

    Sequence, based on observed residues (ATOM records): (download)
    >2yzeD (D:)
    tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
    kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
    evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
    ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
    hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >2yzeE (E:)
    mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
    nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
    hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
    ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
    deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
    fc
    

    Sequence, based on observed residues (ATOM records): (download)
    >2yzeE (E:)
    tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
    kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
    evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
    ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
    hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >2yzeF (F:)
    mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
    nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
    hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
    ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
    deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
    fc
    

    Sequence, based on observed residues (ATOM records): (download)
    >2yzeF (F:)
    tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
    kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
    evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
    ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
    hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >2yzeG (G:)
    mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
    nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
    hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
    ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
    deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
    fc
    

    Sequence, based on observed residues (ATOM records): (download)
    >2yzeG (G:)
    tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
    kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
    evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
    ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
    hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >2yzeH (H:)
    mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
    nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
    hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
    ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
    deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
    fc
    

    Sequence, based on observed residues (ATOM records): (download)
    >2yzeH (H:)
    tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
    kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
    evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
    ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
    hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn