PDB entry 2yzc

View 2yzc on RCSB PDB site
Description: Crystal structure of uricase from Arthrobacter globiformis in complex with allantoate
Class: oxidoreductase
Keywords: uricase, oxidoreductase, allantoate
Deposited on 2007-05-05, released 2008-05-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 1.88 Å
R-factor: 0.161
AEROSPACI score: 0.51 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZC
    Domains in SCOPe 2.08: d2yzca1, d2yzca2
  • Chain 'B':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZC
    Domains in SCOPe 2.08: d2yzcb1, d2yzcb2
  • Chain 'C':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZC
    Domains in SCOPe 2.08: d2yzcc1, d2yzcc2
  • Chain 'D':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZC
    Domains in SCOPe 2.08: d2yzcd1, d2yzcd2
  • Chain 'E':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZC
    Domains in SCOPe 2.08: d2yzce1, d2yzce2
  • Chain 'F':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZC
    Domains in SCOPe 2.08: d2yzcf1, d2yzcf2
  • Chain 'G':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZC
    Domains in SCOPe 2.08: d2yzcg1, d2yzcg2
  • Chain 'H':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZC
    Domains in SCOPe 2.08: d2yzch1, d2yzch2
  • Heterogens: 1AL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2yzcA (A:)
    mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
    nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
    hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
    ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
    deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
    fc
    

    Sequence, based on observed residues (ATOM records): (download)
    >2yzcA (A:)
    tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
    kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
    evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
    ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
    hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2yzcB (B:)
    mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
    nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
    hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
    ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
    deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
    fc
    

    Sequence, based on observed residues (ATOM records): (download)
    >2yzcB (B:)
    tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
    kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
    evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
    ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
    hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >2yzcC (C:)
    mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
    nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
    hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
    ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
    deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
    fc
    

    Sequence, based on observed residues (ATOM records): (download)
    >2yzcC (C:)
    tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
    kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
    evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
    ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
    hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >2yzcD (D:)
    mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
    nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
    hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
    ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
    deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
    fc
    

    Sequence, based on observed residues (ATOM records): (download)
    >2yzcD (D:)
    tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
    kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
    evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
    ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
    hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >2yzcE (E:)
    mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
    nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
    hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
    ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
    deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
    fc
    

    Sequence, based on observed residues (ATOM records): (download)
    >2yzcE (E:)
    tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
    kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
    evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
    ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
    hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >2yzcF (F:)
    mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
    nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
    hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
    ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
    deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
    fc
    

    Sequence, based on observed residues (ATOM records): (download)
    >2yzcF (F:)
    tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
    kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
    evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
    ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
    hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >2yzcG (G:)
    mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
    nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
    hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
    ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
    deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
    fc
    

    Sequence, based on observed residues (ATOM records): (download)
    >2yzcG (G:)
    tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
    kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
    evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
    ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
    hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >2yzcH (H:)
    mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
    nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
    hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
    ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
    deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
    fc
    

    Sequence, based on observed residues (ATOM records): (download)
    >2yzcH (H:)
    tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
    kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
    evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
    ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
    hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn