PDB entry 2yzb

View 2yzb on RCSB PDB site
Description: Crystal structure of uricase from Arthrobacter globiformis in complex with uric acid (substrate)
Class: oxidoreductase
Keywords: uricase, oxidoreductase, uric acid
Deposited on 2007-05-05, released 2008-05-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.19
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZB
    Domains in SCOPe 2.08: d2yzba1, d2yzba2
  • Chain 'B':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZB
    Domains in SCOPe 2.08: d2yzbb1, d2yzbb2
  • Chain 'C':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZB
    Domains in SCOPe 2.08: d2yzbc1, d2yzbc2
  • Chain 'D':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZB
    Domains in SCOPe 2.08: d2yzbd1, d2yzbd2
  • Chain 'E':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZB
    Domains in SCOPe 2.08: d2yzbe1, d2yzbe2
  • Chain 'F':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZB
    Domains in SCOPe 2.08: d2yzbf1, d2yzbf2
  • Chain 'G':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZB
    Domains in SCOPe 2.08: d2yzbg1, d2yzbg2
  • Chain 'H':
    Compound: Uricase
    Species: Arthrobacter globiformis
    Database cross-references and differences (RAF-indexed):
    • PDB 2YZB
    Domains in SCOPe 2.08: d2yzbh1, d2yzbh2
  • Heterogens: URC, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2yzbA (A:)
mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
fc

    Sequence, based on observed residues (ATOM records): (download) 
    >2yzbA (A:)
tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2yzbB (B:)
mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
fc

    Sequence, based on observed residues (ATOM records): (download) 
    >2yzbB (B:)
tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2yzbC (C:)
mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
fc

    Sequence, based on observed residues (ATOM records): (download) 
    >2yzbC (C:)
tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2yzbD (D:)
mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
fc

    Sequence, based on observed residues (ATOM records): (download) 
    >2yzbD (D:)
tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2yzbE (E:)
mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
fc

    Sequence, based on observed residues (ATOM records): (download) 
    >2yzbE (E:)
tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiws

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2yzbF (F:)
mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
fc

    Sequence, based on observed residues (ATOM records): (download) 
    >2yzbF (F:)
tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >2yzbG (G:)
mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
fc

    Sequence, based on observed residues (ATOM records): (download) 
    >2yzbG (G:)
tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >2yzbH (H:)
mtataetstgtkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagd
nahvvatdtqkntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrind
hdhafsrnksevrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdr
ilatdvsarwryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpei
deikmslpnkhhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsniag
fc

    Sequence, based on observed residues (ATOM records): (download) 
    >2yzbH (H:)
tkvvlgqnqygkaevrlvkvtrntarheiqdlnvtsqlrgdfeaahtagdnahvvatdtq
kntvyafardgfatteefllrlgkhftegfdwvtggrwaaqqffwdrindhdhafsrnks
evrtavleisgseqaivagiegltvlkstgsefhgfprdkyttlqettdrilatdvsarw
ryntvevdfdavyasvrglllkafaethslalqqtmyemgraviethpeideikmslpnk
hhflvdlqpfgqdnpnevfyaadrpyglieatiqregsradhpiwsn