PDB entry 2yyu
View 2yyu on RCSB PDB site
Description: Crystal structure of uncharacterized conserved protein from Geobacillus kaustophilus
Class: lyase
Keywords: TIM barrel, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, LYASE
Deposited on
2007-05-02, released
2007-11-06
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.214
AEROSPACI score: 0.38
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: orotidine 5'-phosphate decarboxylase
Species: Geobacillus kaustophilus [TaxId:235909]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2yyua_ - Chain 'B':
Compound: orotidine 5'-phosphate decarboxylase
Species: Geobacillus kaustophilus [TaxId:235909]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2yyub_ - Heterogens: C5P, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2yyuA (A:)
ghmhtpfivaldfpskqeverflrpfagtplfvkvgmelyyqegpaivaflkeqghavfl
dlklhdipntvkqamkglarvgadlvnvhaaggrrmmeaaiegldagtpsgrmrprciav
tqltstdermlheelwisrplvetvahyaalakesgldgvvcsaneaafikercgasfla
vtpgirfaddaahdqvrvvtprkaralgsdyivigrsltraadplrtyarlqhewngger
esttpt
Sequence, based on observed residues (ATOM records): (download)
>2yyuA (A:)
tpfivaldfpskqeverflrpfagtplfvkvgmelyyqegpaivaflkeqghavfldlkl
hdipntvkqamkglarvgadlvnvhaaggrrmmeaaiegldagtpsgrmrprciavtqlt
stdermlheelwisrplvetvahyaalakesgldgvvcsaneaafikercgasflavtpg
irfadrvvtprkaralgsdyivigrsltraadplrtyarlqhewn
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2yyuB (B:)
ghmhtpfivaldfpskqeverflrpfagtplfvkvgmelyyqegpaivaflkeqghavfl
dlklhdipntvkqamkglarvgadlvnvhaaggrrmmeaaiegldagtpsgrmrprciav
tqltstdermlheelwisrplvetvahyaalakesgldgvvcsaneaafikercgasfla
vtpgirfaddaahdqvrvvtprkaralgsdyivigrsltraadplrtyarlqhewngger
esttpt
Sequence, based on observed residues (ATOM records): (download)
>2yyuB (B:)
htpfivaldfpskqeverflrpfagtplfvkvgmelyyqegpaivaflkeqghavfldlk
lhdipntvkqamkglarvgadlvnvhaaggrrmmeaaiegldagtpsgrmrprciavtql
tstdermlheelwisrplvetvahyaalakesgldgvvcsaneaafikercgasflavtp
girfaddaarvvtprkaralgsdyivigrsltraadplrtyarlqhewn