PDB entry 2yyh

View 2yyh on RCSB PDB site
Description: Crystal structure of Nudix family protein from Aquifex aeolicus
Deposited on 2007-04-30, released 2007-11-06
The last revision was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.211
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 8-OXO-dGTPase domain
    Species: Aquifex aeolicus [TaxId:224324]
    Gene: mutT
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: 8-OXO-dGTPase domain
    Species: Aquifex aeolicus [TaxId:224324]
    Gene: mutT
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: 8-OXO-dGTPase domain
    Species: Aquifex aeolicus [TaxId:224324]
    Gene: mutT
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: 8-OXO-dGTPase domain
    Species: Aquifex aeolicus [TaxId:224324]
    Gene: mutT
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2yyhA (A:)
    mgfnvktpllatdviirlwdgenfkgivlierkyppvglalpggfvevgerveeaaarem
    reetglevrlhklmgvysdperdprahvvsvvwigdaqgepkagsdakkvkvyrleeipl
    dklvfdhkkiildflkgny
    

    Sequence, based on observed residues (ATOM records):
    >2yyhA (A:)
    gfnvktpllatdviirlwdgenfkgivlierkyppvglalpggfvevgerveeaaaremr
    eetglevrlhklmgvysdperdprahvvsvvwigdaqgepkagsdakkvkvyrleeipld
    klvfdhkkiildflkgny
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2yyhB (B:)
    mgfnvktpllatdviirlwdgenfkgivlierkyppvglalpggfvevgerveeaaarem
    reetglevrlhklmgvysdperdprahvvsvvwigdaqgepkagsdakkvkvyrleeipl
    dklvfdhkkiildflkgny
    

    Sequence, based on observed residues (ATOM records):
    >2yyhB (B:)
    gfnvktpllatdviirlwdgenfkgivlierkyppvglalpggfvevgerveeaaaremr
    eetglevrlhklmgvysdperdprahvvsvvwigdaqgepkagsdakkvkvyrleeipld
    klvfdhkkiildflkgny
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2yyhC (C:)
    mgfnvktpllatdviirlwdgenfkgivlierkyppvglalpggfvevgerveeaaarem
    reetglevrlhklmgvysdperdprahvvsvvwigdaqgepkagsdakkvkvyrleeipl
    dklvfdhkkiildflkgny
    

    Sequence, based on observed residues (ATOM records):
    >2yyhC (C:)
    fnvktpllatdviirlwdgenfkgivlierkyppvglalpggfvevgerveeaaaremre
    etglevrlhklmgvysdperdprahvvsvvwigdaqgepkagsdakkvkvyrleeipldk
    lvfdhkkiildflkgny
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2yyhD (D:)
    mgfnvktpllatdviirlwdgenfkgivlierkyppvglalpggfvevgerveeaaarem
    reetglevrlhklmgvysdperdprahvvsvvwigdaqgepkagsdakkvkvyrleeipl
    dklvfdhkkiildflkgny
    

    Sequence, based on observed residues (ATOM records):
    >2yyhD (D:)
    vktpllatdviirlwdgenfkgivlierkyppvglalpggfvevgerveeaaaremreet
    glevrlhklmgvysdperdprahvvsvvwigdaqgepkagsdakkvkvyrleeipldklv
    fdhkkiildflkgny