PDB entry 2yx9

View 2yx9 on RCSB PDB site
Description: Crystal structure of D298K copper amine oxidase from Arthrobacter globiformis
Class: oxidoreductase
Keywords: topaquinone, lysine tyrosylquinone, TPQ, LTQ, cofactor, biogenesis, copper, OXIDOREDUCTASE
Deposited on 2007-04-25, released 2008-04-08
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 1.68 Å
R-factor: 0.245
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: phenylethylamine oxidase
    Species: Arthrobacter globiformis [TaxId:1665]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P46881
      • engineered (297)
    Domains in SCOPe 2.08: d2yx9a1, d2yx9a2, d2yx9a3
  • Chain 'B':
    Compound: phenylethylamine oxidase
    Species: Arthrobacter globiformis [TaxId:1665]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P46881
      • engineered (297)
    Domains in SCOPe 2.08: d2yx9b1, d2yx9b2, d2yx9b3
  • Heterogens: CU, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2yx9A (A:)
mtpstiqtaspfrlasageisevqgilrtagllgpekriaylgvldpargagseaedrrf
rvfihdvsgarpqevtvsvtngtvisaveldtaatgelpvleeefevveqllatderwlk
alaarnldvskvrvaplsagvfeyaeergrrilrglafvqdfpedsawahpvdglvayvd
vvskevtrvidtgvfpvpaehgnytdpeltgplrttqkpisitqpegpsftvtggnhiew
ekwsldvgfdvregvvlhniafrdgdrlrpiinrasiaemvvpygdpspirswqnyfktg
eylvgqyanslelgcdclgditylspvisdafgnpreirngicmheedwgilakhsdlws
ginytrrnrrmvisffttignydygfywylyldgtiefeakatgvvftsafpeggsdnis
qlapglgapfhqhifsarldmaidgftnrveeedvvrqtmgpgnergnafsrkrtvltre
seavreadartgrtwiisnpesknrlnepvgyklhahnqptlladpgssiarraafatkd
lwvtryadderyptgdfvnqhsggaglpsyiaqdrdidgqdivvwhtfglthfprvedwp
impvdtvgfklrpegffdrspvldvpanpsqsgshchg

    Sequence, based on observed residues (ATOM records): (download) 
    >2yx9A (A:)
aspfrlasageisevqgilrtagllgpekriaylgvldpargagseaedrrfrvfihdvs
garpqevtvsvtngtvisaveldtaatgelpvleeefevveqllatderwlkalaarnld
vskvrvaplsagvfeyaeergrrilrglafvqdfpedsawahpvdglvayvdvvskevtr
vidtgvfpvpaehgnytdpeltgplrttqkpisitqpegpsftvtggnhiewekwsldvg
fdvregvvlhniafrdgdrlrpiinrasiaemvvpygdpspirswqnyfktgeylvgqya
nslelgcdclgditylspvisdafgnpreirngicmheedwgilakhsdlwsginytrrn
rrmvisffttignydygfywylyldgtiefeakatgvvftsafpeggsdnisqlapglga
pfhqhifsarldmaidgftnrveeedvvrqtmgpgnergnafsrkrtvltreseavread
artgrtwiisnpesknrlnepvgyklhahnqptlladpgssiarraafatkdlwvtryad
deryptgdfvnqhsggaglpsyiaqdrdidgqdivvwhtfglthfprvedwpimpvdtvg
fklrpegffdrspvldvpan

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2yx9B (B:)
mtpstiqtaspfrlasageisevqgilrtagllgpekriaylgvldpargagseaedrrf
rvfihdvsgarpqevtvsvtngtvisaveldtaatgelpvleeefevveqllatderwlk
alaarnldvskvrvaplsagvfeyaeergrrilrglafvqdfpedsawahpvdglvayvd
vvskevtrvidtgvfpvpaehgnytdpeltgplrttqkpisitqpegpsftvtggnhiew
ekwsldvgfdvregvvlhniafrdgdrlrpiinrasiaemvvpygdpspirswqnyfktg
eylvgqyanslelgcdclgditylspvisdafgnpreirngicmheedwgilakhsdlws
ginytrrnrrmvisffttignydygfywylyldgtiefeakatgvvftsafpeggsdnis
qlapglgapfhqhifsarldmaidgftnrveeedvvrqtmgpgnergnafsrkrtvltre
seavreadartgrtwiisnpesknrlnepvgyklhahnqptlladpgssiarraafatkd
lwvtryadderyptgdfvnqhsggaglpsyiaqdrdidgqdivvwhtfglthfprvedwp
impvdtvgfklrpegffdrspvldvpanpsqsgshchg

    Sequence, based on observed residues (ATOM records): (download) 
    >2yx9B (B:)
aspfrlasageisevqgilrtagllgpekriaylgvldpargagseaedrrfrvfihdvs
garpqevtvsvtngtvisaveldtaatgelpvleeefevveqllatderwlkalaarnld
vskvrvaplsagvfeyaeergrrilrglafvqdfpedsawahpvdglvayvdvvskevtr
vidtgvfpvpaehgnytdpeltgplrttqkpisitqpegpsftvtggnhiewekwsldvg
fdvregvvlhniafrdgdrlrpiinrasiaemvvpygdpspirswqnyfktgeylvgqya
nslelgcdclgditylspvisdafgnpreirngicmheedwgilakhsdlwsginytrrn
rrmvisffttignydygfywylyldgtiefeakatgvvftsafpeggsdnisqlapglga
pfhqhifsarldmaidgftnrveeedvvrqtmgpgnergnafsrkrtvltreseavread
artgrtwiisnpesknrlnepvgyklhahnqptlladpgssiarraafatkdlwvtryad
deryptgdfvnqhsggaglpsyiaqdrdidgqdivvwhtfglthfprvedwpimpvdtvg
fklrpegffdrspvldvpan