PDB entry 2ywy
View 2ywy on RCSB PDB site
Description: Structure of new antigen receptor variable domain from sharks
Class: immune system
Keywords: ig vnar, 1-a-7, immune system
Deposited on
2007-04-23, released
2007-10-30
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.71 Å
R-factor: 0.189
AEROSPACI score: 0.29
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: new antigen receptor variable domain
Species: Orectolobus maculatus [TaxId:168098]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2ywya_ - Chain 'B':
Compound: new antigen receptor variable domain
Species: Orectolobus maculatus [TaxId:168098]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2ywyb_ - Chain 'C':
Compound: new antigen receptor variable domain
Species: Orectolobus maculatus [TaxId:168098]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2ywyc_ - Chain 'D':
Compound: new antigen receptor variable domain
Species: Orectolobus maculatus [TaxId:168098]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2ywyd_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>2ywyA (A:)
awvdqtprsvtketgesltincalknaaddlertdwyrttlgstneqkisiggryvetvn
kgsksfslrirdlrvedsgtykcgayfsdamsnysypipgekgagtvltvkaa
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2ywyB (B:)
awvdqtprsvtketgesltincalknaaddlertdwyrttlgstneqkisiggryvetvn
kgsksfslrirdlrvedsgtykcgayfsdamsnysypipgekgagtvltvkaa
Sequence, based on observed residues (ATOM records): (download)
>2ywyB (B:)
awvdqtprsvtketgesltincalknaaddlertdwyrttlgstneqkisiggryvetvn
kgsksfslrirdlrvedsgtykcgayfspgekgagtvltvkaa
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>2ywyC (C:)
awvdqtprsvtketgesltincalknaaddlertdwyrttlgstneqkisiggryvetvn
kgsksfslrirdlrvedsgtykcgayfsdamsnysypipgekgagtvltvkaa
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2ywyD (D:)
awvdqtprsvtketgesltincalknaaddlertdwyrttlgstneqkisiggryvetvn
kgsksfslrirdlrvedsgtykcgayfsdamsnysypipgekgagtvltvkaa
Sequence, based on observed residues (ATOM records): (download)
>2ywyD (D:)
awvdqtprsvtketgesltincalknaaddlertdwyrttlgstneqkisiggryvetvn
kgsksfslrirdlrvedsgtykcgayfspgekgagtvltvkaa