PDB entry 2ywq

View 2ywq on RCSB PDB site
Description: Crystal structure of Thermus thermophilus Protein Y N-terminal domain
Class: ribosomal protein
Keywords: Sigma-54 modulation protein family, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, RIBOSOMAL PROTEIN
Deposited on 2007-04-21, released 2008-04-15
The last revision prior to the SCOP 1.75 freeze date was dated 2008-04-15, with a file datestamp of 2008-04-11.
Experiment type: XRAY
Resolution: 2.64 Å
R-factor: 0.238
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ribosomal subunit interface protein
    Species: Thermus thermophilus
    Gene: TTHA1294
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ywqa1
  • Chain 'B':
    Compound: Ribosomal subunit interface protein
    Species: Thermus thermophilus
    Gene: TTHA1294
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ywqb1
  • Chain 'C':
    Compound: Ribosomal subunit interface protein
    Species: Thermus thermophilus
    Gene: TTHA1294
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ywqc1
  • Chain 'D':
    Compound: Ribosomal subunit interface protein
    Species: Thermus thermophilus
    Gene: TTHA1294
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ywqd1
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2ywqA (A:)
mniykligrnleitdairdyvekklarldryqdgelmakvvlslagsphvekkaraeiqv
dlpgglvrveeedadlyaaidravdrletqvkrfrerryvgkrhs

    Sequence, based on observed residues (ATOM records): (download) 
    >2ywqA (A:)
mniykligrnleitdairdyvekklarldryqdgelmakvvlslagkaraeiqvdlpggl
vrveeedadlyaaidravdrletqvkrfr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2ywqB (B:)
mniykligrnleitdairdyvekklarldryqdgelmakvvlslagsphvekkaraeiqv
dlpgglvrveeedadlyaaidravdrletqvkrfrerryvgkrhs

    Sequence, based on observed residues (ATOM records): (download) 
    >2ywqB (B:)
mniykligrnleitdairdyvekklarldryqdgelmakvvlslagkaraeiqvdlpggl
vrveeedadlyaaidravdrletqvkrfr

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2ywqC (C:)
mniykligrnleitdairdyvekklarldryqdgelmakvvlslagsphvekkaraeiqv
dlpgglvrveeedadlyaaidravdrletqvkrfrerryvgkrhs

    Sequence, based on observed residues (ATOM records): (download) 
    >2ywqC (C:)
mniykligrnleitdairdyvekklarldryqdgelmakvvlslagkkaraeiqvdlpgg
lvrveeedadlyaaidravdrletqvkrfr

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2ywqD (D:)
mniykligrnleitdairdyvekklarldryqdgelmakvvlslagsphvekkaraeiqv
dlpgglvrveeedadlyaaidravdrletqvkrfrerryvgkrhs

    Sequence, based on observed residues (ATOM records): (download) 
    >2ywqD (D:)
mniykligrnleitdairdyvekklarldryqdgelmakvvlslagkaraeiqvdlpggl
vrveeedadlyaaidravdrletqvkrfr