PDB entry 2yr5

View 2yr5 on RCSB PDB site
Description: Crystal structure of L-phenylalanine oxidase from Psuedomonas sp.P501
Deposited on 2007-04-02, released 2008-04-15
The last revision was dated 2012-12-12, with a file datestamp of 2012-12-07.
Experiment type: XRAY
Resolution: 1.25 Å
R-factor: 0.103
AEROSPACI score: 0.84 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Pro-enzyme of L-phenylalanine oxidase
    Species: Pseudomonas sp. P-501 [TaxId:266807]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Pro-enzyme of L-phenylalanine oxidase
    Species: Pseudomonas sp. P-501 [TaxId:266807]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: SO4, FAD, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2yr5A (A:)
gvtviprllglkdekkiattvgearlsginyrhpdsalvsypvaaaaplgrlpagnyria
ivgggaggiaalyelgrlaatlpagsgidvqiyeadpdsflhdrpgikaikvrglkagrv
saalvhngdpasgdtiyevgamrfpeiagltwhyasaafgdaapikvfpnpgkvptefvf
gnrvdryvgsdpkdwedpdsptlkvlgvvagglvgnpqgenvamypianvdpakiaailn
aatppadaleriqtkywpefiaqydgltlgaavreivtvafekgtlppvdgvldvdesis
yyvelfgrfgfgtggfkplynislvemmrlilwdysneytlpvtenvefirnlflkaqnv
gagklvvqvrqervanachsgtasaraqllsydshnavhseaydfvilavphdqltpivs
rsgfehaasqnlgdaglglethtynqvypplllsdsspaanarivtaigqlhmarsskvf
atvktaaldqpwvpqwrgepikavvsdsglaasyvvpspivedgqapeyssllasytwed
dstrlrhdfglypqnpatetgtadgmyrtmvnrayryvkyagasnaqpwwfyqllaeart
adrfvfdwttnktaggfkldmtgdhhqsnlcfryhthalaasldnrffiasdsyshlggw
legafmsalnavaglivranrgdvsalstearplviglrpvvkvpaaelatsqlehhhhh
h

    Sequence, based on observed residues (ATOM records):
    >2yr5A (A:)
kiattvgearlsginyrhpdsalvsypvaaaaplgrlpagnyriaivgggaggiaalyel
grlaatlpagsgidvqiyeadpdsflhdraikvrglkagrvsaalvhngdpasgdtiyev
gamrfpeiagltwhyasaafgdaapikvfpnpgkvptefvfgnrvdryvgsdpkdwedpd
sptlkvlgvvagglvgnpqgenvamypianvdpakiaailnaatppadaleriqtkywpe
fiaqydgltlgaavreivtvafekgtlppvdgvldvdesisyyvelfgrfgfgtggfkpl
ynislvemmrlilwdysneytlpvtenvefirnlflkaqnvgagklvvqvrqervanach
sgtasaraqllsydshnavhseaydfvilavphdqltpivsrsgfehaasqnlgdaglgl
ethtynqvypplllsdsspaanarivtaigqlhmarsskvfatvktaaldqpwvpqwrge
pikavvsdsglaasyvvpspivapeyssllasytweddstrlrhdfglypqnpatetgta
dgmyrtmvnrayryvkyagasnaqpwwfyqllaeartadrfvfdwttnktaggfkldmtg
dhhqsnlcfryhthalaasldnrffiasdsyshlggwlegafmsalnavaglivranrgd
vsalstearplviglrpvvkvpaa

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2yr5B (B:)
gvtviprllglkdekkiattvgearlsginyrhpdsalvsypvaaaaplgrlpagnyria
ivgggaggiaalyelgrlaatlpagsgidvqiyeadpdsflhdrpgikaikvrglkagrv
saalvhngdpasgdtiyevgamrfpeiagltwhyasaafgdaapikvfpnpgkvptefvf
gnrvdryvgsdpkdwedpdsptlkvlgvvagglvgnpqgenvamypianvdpakiaailn
aatppadaleriqtkywpefiaqydgltlgaavreivtvafekgtlppvdgvldvdesis
yyvelfgrfgfgtggfkplynislvemmrlilwdysneytlpvtenvefirnlflkaqnv
gagklvvqvrqervanachsgtasaraqllsydshnavhseaydfvilavphdqltpivs
rsgfehaasqnlgdaglglethtynqvypplllsdsspaanarivtaigqlhmarsskvf
atvktaaldqpwvpqwrgepikavvsdsglaasyvvpspivedgqapeyssllasytwed
dstrlrhdfglypqnpatetgtadgmyrtmvnrayryvkyagasnaqpwwfyqllaeart
adrfvfdwttnktaggfkldmtgdhhqsnlcfryhthalaasldnrffiasdsyshlggw
legafmsalnavaglivranrgdvsalstearplviglrpvvkvpaaelatsqlehhhhh
h

    Sequence, based on observed residues (ATOM records):
    >2yr5B (B:)
kiattvgearlsginyrhpdsalvsypvaaaaplgrlpagnyriaivgggaggiaalyel
grlaatlpagsgidvqiyeadpdsflhdraikvrglkagrvsaalvhngdpasgdtiyev
gamrfpeiagltwhyasaafgdaapikvfpnpgkvptefvfgnrvdryvgsdpkdwedpd
sptlkvlgvvagglvgnpqgenvamypianvdpakiaailnaatppadaleriqtkywpe
fiaqydgltlgaavreivtvafekgtlppvdgvldvdesisyyvelfgrfgfgtggfkpl
ynislvemmrlilwdysneytlpvtenvefirnlflkaqnvgagklvvqvrqervanach
sgtasaraqllsydshnavhseaydfvilavphdqltpivsrsgfehaasqnlgdaglgl
ethtynqvypplllsdsspaanarivtaigqlhmarsskvfatvktaaldqpwvpqwrge
pikavvsdsglaasyvvpspivapeyssllasytweddstrlrhdfglypqnpatetgta
dgmyrtmvnrayryvkyagasnaqpwwfyqllaeartadrfvfdwttnktaggfkldmtg
dhhqsnlcfryhthalaasldnrffiasdsyshlggwlegafmsalnavaglivranrgd
vsalstearplviglrpvvkvpaa