PDB entry 2ypw

View 2ypw on RCSB PDB site
Description: atomic model for the n-terminus of trao fitted in the full-length structure of the bacterial pkm101 type iv secretion system core complex
Deposited on 2012-11-02, released 2013-04-03
The last revision was dated 2017-08-23, with a file datestamp of 2017-08-18.
Experiment type: EM
Resolution: 12.4 Å
R-factor: N/A
AEROSPACI score: -0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: TraO
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: TraO
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: TraO
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: TraO
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: TraO
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: TraO
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: TraO
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: TraO
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: TraO
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: TraO
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: TraO
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'L':
    Compound: TraO
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'M':
    Compound: TraO
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'N':
    Compound: TraO
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >2ypwA (A:)
    levgrnspydyriksvvynpvnvvkidavagvathivvapdetyithafgdsesrtfahk
    mnhffvkpkqamsdtnlvivtdkrtynivlhfigeetkknadgtvsksfiet
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >2ypwB (B:)
    levgrnspydyriksvvynpvnvvkidavagvathivvapdetyithafgdsesrtfahk
    mnhffvkpkqamsdtnlvivtdkrtynivlhfigeetkknadgtvsksfiet
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >2ypwC (C:)
    levgrnspydyriksvvynpvnvvkidavagvathivvapdetyithafgdsesrtfahk
    mnhffvkpkqamsdtnlvivtdkrtynivlhfigeetkknadgtvsksfiet
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >2ypwD (D:)
    levgrnspydyriksvvynpvnvvkidavagvathivvapdetyithafgdsesrtfahk
    mnhffvkpkqamsdtnlvivtdkrtynivlhfigeetkknadgtvsksfiet
    

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >2ypwE (E:)
    levgrnspydyriksvvynpvnvvkidavagvathivvapdetyithafgdsesrtfahk
    mnhffvkpkqamsdtnlvivtdkrtynivlhfigeetkknadgtvsksfiet
    

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >2ypwF (F:)
    levgrnspydyriksvvynpvnvvkidavagvathivvapdetyithafgdsesrtfahk
    mnhffvkpkqamsdtnlvivtdkrtynivlhfigeetkknadgtvsksfiet
    

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >2ypwG (G:)
    levgrnspydyriksvvynpvnvvkidavagvathivvapdetyithafgdsesrtfahk
    mnhffvkpkqamsdtnlvivtdkrtynivlhfigeetkknadgtvsksfiet
    

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >2ypwH (H:)
    levgrnspydyriksvvynpvnvvkidavagvathivvapdetyithafgdsesrtfahk
    mnhffvkpkqamsdtnlvivtdkrtynivlhfigeetkknadgtvsksfiet
    

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records:
    >2ypwI (I:)
    levgrnspydyriksvvynpvnvvkidavagvathivvapdetyithafgdsesrtfahk
    mnhffvkpkqamsdtnlvivtdkrtynivlhfigeetkknadgtvsksfiet
    

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records:
    >2ypwJ (J:)
    levgrnspydyriksvvynpvnvvkidavagvathivvapdetyithafgdsesrtfahk
    mnhffvkpkqamsdtnlvivtdkrtynivlhfigeetkknadgtvsksfiet
    

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records:
    >2ypwK (K:)
    levgrnspydyriksvvynpvnvvkidavagvathivvapdetyithafgdsesrtfahk
    mnhffvkpkqamsdtnlvivtdkrtynivlhfigeetkknadgtvsksfiet
    

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >2ypwL (L:)
    levgrnspydyriksvvynpvnvvkidavagvathivvapdetyithafgdsesrtfahk
    mnhffvkpkqamsdtnlvivtdkrtynivlhfigeetkknadgtvsksfiet
    

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records:
    >2ypwM (M:)
    levgrnspydyriksvvynpvnvvkidavagvathivvapdetyithafgdsesrtfahk
    mnhffvkpkqamsdtnlvivtdkrtynivlhfigeetkknadgtvsksfiet
    

  • Chain 'N':
    Sequence; same for both SEQRES and ATOM records:
    >2ypwN (N:)
    levgrnspydyriksvvynpvnvvkidavagvathivvapdetyithafgdsesrtfahk
    mnhffvkpkqamsdtnlvivtdkrtynivlhfigeetkknadgtvsksfiet