PDB entry 2yp8

View 2yp8 on RCSB PDB site
Description: Haemagglutinin of 2005 Human H3N2 Virus in Complex with Human Receptor Analogue 6SLN
Class: viral protein
Keywords: viral protein, receptor binding, membrane fusion, influenza virus evolution, glycoprotein
Deposited on 2012-10-29, released 2012-11-07
The last revision prior to the SCOPe 2.05 freeze date was dated 2013-01-16, with a file datestamp of 2013-01-11.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.17412
AEROSPACI score: 0.53 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hemagglutinin
    Species: INFLUENZA A VIRUS [TaxId:11320]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d2yp8a1
  • Heterogens: NAG, EPE, TAM, SIA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2yp8A (A:)
qklpgndnstatlclghhavpngtivktitndqievtnatelvqssstggicdsphqild
genctlidallgdpqcdgfqnkkwdlfverskaysncypydvpdyaslrslvassgtlef
nnesfnwtgvtqngtssackrksnnsffsrlnwlthlkfkypalnvtmpnnekfdklyiw
gvhhpgtdndqiflyaqasgritvstkrsqqtvipnigsrprvrnipsrisiywtivkpg
dillinstgnliaprgyfkirsgkssimrsdapigkcnsecitpngsipndkpfqnvnri
tygacpryvkqntlklatgmrnvpekqtqgifgaiagfiengwegmvdgwygfrhqnseg
igqaadlkstqaainqingklnrligktnekfhqiekefsevegriqdlekyvedtkidl
wsynaellvalenqhtidltdsemnklfertkkqlrenaedmgngcfkiyhkcdnacigs
irngtydhdvyrdealnnrfqik

    Sequence, based on observed residues (ATOM records): (download) 
    >2yp8A (A:)
nstatlclghhavpngtivktitndqievtnatelvqssstggicdsphqildgenctli
dallgdpqcdgfqnkkwdlfverskaysncypydvpdyaslrslvassgtlefnnesfnw
tgvtqngtssackrksnnsffsrlnwlthlkfkypalnvtmpnnekfdklyiwgvhhpgt
dndqiflyaqasgritvstkrsqqtvipnigsrprvrnipsrisiywtivkpgdillins
tgnliaprgyfkirsgkssimrsdapigkcnsecitpngsipndkpfqnvnritygacpr
yvkqntlklatgmrnvpekqaiagfiengwegmvdgwygfrhqnsegigqaadlkstqaa
inqingklnrligktnekfhqiekefsevegriqdlekyvedtkidlwsynaellvalen
qhtidltdsemnklfertkkqlrenaedmgngcfkiyhkcdnacigsirngtydhdvyrd
ealnnrfqik