PDB entry 2yoo

View 2yoo on RCSB PDB site
Description: Cholest-4-en-3-one bound structure of CYP142 from Mycobacterium smegmatis
Class: oxidoreductase
Keywords: oxidoreductase, cholesterol metabolism
Deposited on 2012-10-25, released 2013-02-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-02-07, with a file datestamp of 2018-02-02.
Experiment type: XRAY
Resolution: 1.69 Å
R-factor: N/A
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: p450 heme-thiolate protein
    Species: Mycobacterium smegmatis str. MC2 155 [TaxId:246196]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yooa_
  • Chain 'B':
    Compound: p450 heme-thiolate protein
    Species: Mycobacterium smegmatis str. MC2 155 [TaxId:246196]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yoob_
  • Chain 'C':
    Compound: p450 heme-thiolate protein
    Species: Mycobacterium smegmatis str. MC2 155 [TaxId:246196]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yooc_
  • Chain 'D':
    Compound: p450 heme-thiolate protein
    Species: Mycobacterium smegmatis str. MC2 155 [TaxId:246196]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yood_
  • Heterogens: HEM, K2B, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2yooA (A:)
mtqmltrpdvdlvngmfyadggareayrwmranepvfrdrnglaaattyqavldaernpe
lfsstggirpdqpgmpymidmddpqhllrrklvnagftrkrvmdkvdsigrlcdtlidav
cergecdfvrdiaaplpmavigdmlgvlpterdmllkwsddlvcglsshvdeaaiqklmd
tfaayteftkdvitkrraeptddlfsvlvnsevegqrmsddeivfetlliliggdettrh
tlsggteqllrhrdqwdalvadvdllpgaieemlrwtspvknmcrtltadtvfhgtelra
gekimlmfesanfdesvfgdpdnfridrnpnshvafgfgthfclgnqlarlelrlmterv
lrrlpdlrladdapvplrpanfvsgpesmpvvftpsapvlahhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2yooA (A:)
ltrpdvdlvngmfyadggareayrwmranepvfrdrnglaaattyqavldaernpelfss
tggirpdqpgmpymidmddpqhllrrklvnagftrkrvmdkvdsigrlcdtlidavcerg
ecdfvrdiaaplpmavigdmlgvlpterdmllkwsddlvcglsshvdeaaiqklmdtfaa
yteftkdvitkrraeptddlfsvlvnsevegqrmsddeivfetlliliggdettrhtlsg
gteqllrhrdqwdalvadvdllpgaieemlrwtspvknmcrtltadtvfhgtelrageki
mlmfesanfdesvfgdpdnfridrnpnshvafgfgthfclgnqlarlelrlmtervlrrl
pdlrladdapvplrpanfvsgpesmpvvftpsapvl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2yooB (B:)
mtqmltrpdvdlvngmfyadggareayrwmranepvfrdrnglaaattyqavldaernpe
lfsstggirpdqpgmpymidmddpqhllrrklvnagftrkrvmdkvdsigrlcdtlidav
cergecdfvrdiaaplpmavigdmlgvlpterdmllkwsddlvcglsshvdeaaiqklmd
tfaayteftkdvitkrraeptddlfsvlvnsevegqrmsddeivfetlliliggdettrh
tlsggteqllrhrdqwdalvadvdllpgaieemlrwtspvknmcrtltadtvfhgtelra
gekimlmfesanfdesvfgdpdnfridrnpnshvafgfgthfclgnqlarlelrlmterv
lrrlpdlrladdapvplrpanfvsgpesmpvvftpsapvlahhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2yooB (B:)
trpdvdlvngmfyadggareayrwmranepvfrdrnglaaattyqavldaernpelfsst
ggirpdqpgmpymidmddpqhllrrklvnagftrkrvmdkvdsigrlcdtlidavcerge
cdfvrdiaaplpmavigdmlgvlpterdmllkwsddlvcglsshvdeaaiqklmdtfaay
teftkdvitkrraeptddlfsvlvnsevegqrmsddeivfetlliliggdettrhtlsgg
teqllrhrdqwdalvadvdllpgaieemlrwtspvknmcrtltadtvfhgtelragekim
lmfesanfdesvfgdpdnfridrnpnshvafgfgthfclgnqlarlelrlmtervlrrlp
dlrladdapvplrpanfvsgpesmpvvftpsapvl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2yooC (C:)
mtqmltrpdvdlvngmfyadggareayrwmranepvfrdrnglaaattyqavldaernpe
lfsstggirpdqpgmpymidmddpqhllrrklvnagftrkrvmdkvdsigrlcdtlidav
cergecdfvrdiaaplpmavigdmlgvlpterdmllkwsddlvcglsshvdeaaiqklmd
tfaayteftkdvitkrraeptddlfsvlvnsevegqrmsddeivfetlliliggdettrh
tlsggteqllrhrdqwdalvadvdllpgaieemlrwtspvknmcrtltadtvfhgtelra
gekimlmfesanfdesvfgdpdnfridrnpnshvafgfgthfclgnqlarlelrlmterv
lrrlpdlrladdapvplrpanfvsgpesmpvvftpsapvlahhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2yooC (C:)
trpdvdlvngmfyadggareayrwmranepvfrdrnglaaattyqavldaernpelfsst
ggirpdqpgmpymidmddpqhllrrklvnagftrkrvmdkvdsigrlcdtlidavcerge
cdfvrdiaaplpmavigdmlgvlpterdmllkwsddlvcglsshvdeaaiqklmdtfaay
teftkdvitkrraeptddlfsvlvnsevegqrmsddeivfetlliliggdettrhtlsgg
teqllrhrdqwdalvadvdllpgaieemlrwtspvknmcrtltadtvfhgtelragekim
lmfesanfdesvfgdpdnfridrnpnshvafgfgthfclgnqlarlelrlmtervlrrlp
dlrladdapvplrpanfvsgpesmpvvftpsapvl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2yooD (D:)
mtqmltrpdvdlvngmfyadggareayrwmranepvfrdrnglaaattyqavldaernpe
lfsstggirpdqpgmpymidmddpqhllrrklvnagftrkrvmdkvdsigrlcdtlidav
cergecdfvrdiaaplpmavigdmlgvlpterdmllkwsddlvcglsshvdeaaiqklmd
tfaayteftkdvitkrraeptddlfsvlvnsevegqrmsddeivfetlliliggdettrh
tlsggteqllrhrdqwdalvadvdllpgaieemlrwtspvknmcrtltadtvfhgtelra
gekimlmfesanfdesvfgdpdnfridrnpnshvafgfgthfclgnqlarlelrlmterv
lrrlpdlrladdapvplrpanfvsgpesmpvvftpsapvlahhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2yooD (D:)
trpdvdlvngmfyadggareayrwmranepvfrdrnglaaattyqavldaernpelfsst
ggirpdqpgmpymidmddpqhllrrklvnagftrkrvmdkvdsigrlcdtlidavcerge
cdfvrdiaaplpmavigdmlgvlpterdmllkwsddlvcglsshvdeaaiqklmdtfaay
teftkdvitkrraeptddlfsvlvnsevegqrmsddeivfetlliliggdettrhtlsgg
teqllrhrdqwdalvadvdllpgaieemlrwtspvknmcrtltadtvfhgtelragekim
lmfesanfdesvfgdpdnfridrnpnshvafgfgthfclgnqlarlelrlmtervlrrlp
dlrladdapvplrpanfvsgpesmpvvftpsapv