PDB entry 2ynx

View 2ynx on RCSB PDB site
Description: crystal structure of ancestral thioredoxin relative to last archaea common ancestor (laca) from the precambrian period
Deposited on 2012-10-19, released 2013-08-21
The last revision was dated 2019-03-06, with a file datestamp of 2019-03-01.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: N/A
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: laca thioredoxin
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 2YNX (Start-105)
  • Chain 'B':
    Compound: laca thioredoxin
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 2YNX (Start-105)
  • Heterogens: ACT, NA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2ynxA (A:)
    msvvqlndenfdevikknnkvvvvdfwaewcgpcrmiapiieelakeyagkvvfgklnvd
    enpeiaakygimsiptllffkngkvvdqlvgampkealkerikkyl
    

    Sequence, based on observed residues (ATOM records):
    >2ynxA (A:)
    svvqlndenfdevikknnkvvvvdfwaewcgpcrmiapiieelakeyagkvvfgklnvde
    npeiaakygimsiptllffkngkvvdqlvgampkealkerikkyl
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2ynxB (B:)
    msvvqlndenfdevikknnkvvvvdfwaewcgpcrmiapiieelakeyagkvvfgklnvd
    enpeiaakygimsiptllffkngkvvdqlvgampkealkerikkyl
    

    Sequence, based on observed residues (ATOM records):
    >2ynxB (B:)
    svvqlndenfdevikknnkvvvvdfwaewcgpcrmiapiieelakeyagkvvfgklnvde
    npeiaakygimsiptllffkngkvvdqlvgampkealkerikkyl