PDB entry 2ymn

View 2ymn on RCSB PDB site
Description: organization of the influenza virus replication machinery
Deposited on 2012-10-09, released 2012-12-05
The last revision was dated 2017-08-23, with a file datestamp of 2017-08-18.
Experiment type: EM
Resolution: 20 Å
R-factor: N/A
AEROSPACI score: -0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nucleoprotein
    Species: INFLUENZA A VIRUS (A/PUERTO RICO/8/1934(H1N1)) [TaxId:211044]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: nucleoprotein
    Species: INFLUENZA A VIRUS (A/PUERTO RICO/8/1934(H1N1)) [TaxId:211044]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: nucleoprotein
    Species: INFLUENZA A VIRUS (A/PUERTO RICO/8/1934(H1N1)) [TaxId:211044]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: nucleoprotein
    Species: INFLUENZA A VIRUS (A/PUERTO RICO/8/1934(H1N1)) [TaxId:211044]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: nucleoprotein
    Species: INFLUENZA A VIRUS (A/PUERTO RICO/8/1934(H1N1)) [TaxId:211044]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: nucleoprotein
    Species: INFLUENZA A VIRUS (A/PUERTO RICO/8/1934(H1N1)) [TaxId:211044]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2ymnA (A:)
matkgtkrsyeqmetdgerqnateirasvgkmidgigrfyiqmctelklsdyegrliqns
ltiermvlsafderrnkyleehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriw
rqanngddataglthmmiwhsnlndatyqrtralvrtgmdprmcslmqgstlprrsgaag
aavkgvgtmvmelirmikrgindrnfwrgengrrtriayermcnilkgkfqtaaqrtmvd
qvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgydferegyslvg
idpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirgtkvvprgklst
rgvqiasnenmetmesstlelrsrywairtrsggntnqqrassgqisiqptfsvqrnlpf
drptimaaftgntegrtsdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfd
msnegsyffgdnaeeydn

    Sequence, based on observed residues (ATOM records):
    >2ymnA (A:)
nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafdtggpiyrr
vdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqrtralvrtgm
dprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrginrrtriayermcnilkgk
fqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgy
dferegyslvgidpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirg
tkvvprgklstrgvqiasnenmetmesstlelrsrywairtrsggntsdmrteiirlmes
arpedvsfqgrgvfelsdekatspivpsfdmsnegsyff

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2ymnB (B:)
matkgtkrsyeqmetdgerqnateirasvgkmidgigrfyiqmctelklsdyegrliqns
ltiermvlsafderrnkyleehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriw
rqanngddataglthmmiwhsnlndatyqrtralvrtgmdprmcslmqgstlprrsgaag
aavkgvgtmvmelirmikrgindrnfwrgengrrtriayermcnilkgkfqtaaqrtmvd
qvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgydferegyslvg
idpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirgtkvvprgklst
rgvqiasnenmetmesstlelrsrywairtrsggntnqqrassgqisiqptfsvqrnlpf
drptimaaftgntegrtsdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfd
msnegsyffgdnaeeydn

    Sequence, based on observed residues (ATOM records):
    >2ymnB (B:)
nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafdtggpiyrr
vdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqrtralvrtgm
dprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrginrrtriayermcnilkgk
fqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgy
dferegyslvgidpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirg
tkvvprgklstrgvqiasnenmetmesstlelrsrywairtrsggntsdmrteiirlmes
arpedvsfqgrgvfelsdekatspivpsfdmsnegsyff

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2ymnC (C:)
matkgtkrsyeqmetdgerqnateirasvgkmidgigrfyiqmctelklsdyegrliqns
ltiermvlsafderrnkyleehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriw
rqanngddataglthmmiwhsnlndatyqrtralvrtgmdprmcslmqgstlprrsgaag
aavkgvgtmvmelirmikrgindrnfwrgengrrtriayermcnilkgkfqtaaqrtmvd
qvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgydferegyslvg
idpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirgtkvvprgklst
rgvqiasnenmetmesstlelrsrywairtrsggntnqqrassgqisiqptfsvqrnlpf
drptimaaftgntegrtsdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfd
msnegsyffgdnaeeydn

    Sequence, based on observed residues (ATOM records):
    >2ymnC (C:)
nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafdtggpiyrr
vdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqrtralvrtgm
dprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrgindrnfwrgengrrtriay
ermcnilkgkfqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsvahksclpac
vygsavasgydferegyslvgidpfrllqnsqvyslirpnenpahksqlvwmachsaafe
dlrvssfirgtkvvprgklstrgvqiasnenmetmesstlelrsrywairtrsggntsdm
rteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsnegsyff

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2ymnD (D:)
matkgtkrsyeqmetdgerqnateirasvgkmidgigrfyiqmctelklsdyegrliqns
ltiermvlsafderrnkyleehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriw
rqanngddataglthmmiwhsnlndatyqrtralvrtgmdprmcslmqgstlprrsgaag
aavkgvgtmvmelirmikrgindrnfwrgengrrtriayermcnilkgkfqtaaqrtmvd
qvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgydferegyslvg
idpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirgtkvvprgklst
rgvqiasnenmetmesstlelrsrywairtrsggntnqqrassgqisiqptfsvqrnlpf
drptimaaftgntegrtsdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfd
msnegsyffgdnaeeydn

    Sequence, based on observed residues (ATOM records):
    >2ymnD (D:)
nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafdtggpiyrr
vdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqrtralvrtgm
dprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrginrrtriayermcnilkgk
fqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgy
dferegyslvgidpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirg
tkvvprgklstrgvqiasnenmetmesstlelrsrywairtrsggntsdmrteiirlmes
arpedvsfqgrgvfelsdekatspivpsfdmsnegsyff

  • Chain 'E':
    Sequence, based on SEQRES records:
    >2ymnE (E:)
matkgtkrsyeqmetdgerqnateirasvgkmidgigrfyiqmctelklsdyegrliqns
ltiermvlsafderrnkyleehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriw
rqanngddataglthmmiwhsnlndatyqrtralvrtgmdprmcslmqgstlprrsgaag
aavkgvgtmvmelirmikrgindrnfwrgengrrtriayermcnilkgkfqtaaqrtmvd
qvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgydferegyslvg
idpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirgtkvvprgklst
rgvqiasnenmetmesstlelrsrywairtrsggntnqqrassgqisiqptfsvqrnlpf
drptimaaftgntegrtsdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfd
msnegsyffgdnaeeydn

    Sequence, based on observed residues (ATOM records):
    >2ymnE (E:)
nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafdtggpiyrr
vdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqrtralvrtgm
dprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrginrrtriayermcnilkgk
fqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgy
dferegyslvgidpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirg
tkvvprgklstrgvqiasnenmetmesstlelrsrywairtrsggntsdmrteiirlmes
arpedvsfqgrgvfelsdekatspivpsfdmsnegsyff

  • Chain 'F':
    Sequence, based on SEQRES records:
    >2ymnF (F:)
matkgtkrsyeqmetdgerqnateirasvgkmidgigrfyiqmctelklsdyegrliqns
ltiermvlsafderrnkyleehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriw
rqanngddataglthmmiwhsnlndatyqrtralvrtgmdprmcslmqgstlprrsgaag
aavkgvgtmvmelirmikrgindrnfwrgengrrtriayermcnilkgkfqtaaqrtmvd
qvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgydferegyslvg
idpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirgtkvvprgklst
rgvqiasnenmetmesstlelrsrywairtrsggntnqqrassgqisiqptfsvqrnlpf
drptimaaftgntegrtsdmrteiirlmesarpedvsfqgrgvfelsdekatspivpsfd
msnegsyffgdnaeeydn

    Sequence, based on observed residues (ATOM records):
    >2ymnF (F:)
nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafdtggpiyrr
vdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqrtralvrtgm
dprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrginrrtriayermcnilkgk
fqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgy
dferegyslvgidpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirg
tkvvprgklstrgvqiasnenmetmesstlelrsrywairtrsggntsdmrteiirlmes
arpedvsfqgrgvfelsdekatspivpsfdmsnegsyff