PDB entry 2yku

View 2yku on RCSB PDB site
Description: Structural Determinants of the Beta-Selectivity of a Bacterial Aminotransferase
Deposited on 2011-05-30, released 2012-05-30
The last revision was dated 2012-08-29, with a file datestamp of 2012-08-24.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.16364
AEROSPACI score: 0.53 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: beta-transaminase
    Species: MESORHIZOBIUM SP. LUK [TaxId:398267]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: beta-transaminase
    Species: MESORHIZOBIUM SP. LUK [TaxId:398267]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: beta-transaminase
    Species: MESORHIZOBIUM SP. LUK [TaxId:398267]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: PLP, GOL, EDO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2ykuA (A:)
mgsshhhhhhssglvprgshmnepigepgrspasdtaekaqaiaaarntfardnpvsagh
herarrsmpggntrsilfhrpfplviaqgtgsrfqdvdghayvnflgeytaglfghshpv
iraaveralavglnlstqtenealfaeavcdrfpsidlvrftnsgteanlmalatatait
grktvlafdggyhggllnfasghaptnapyhvvlgvyndvegtadllkrhghdcaailve
pmlgaggcvpaerafldllraeasrcgallifdevmtsrlsgggaqemlgisadlttlgk
yigggmsfgafggrrdlmerfdpardgafahagtfnnniltmsaghaaltqiytrqaasd
lsasgdrfranlnriavenqaplqftglgslgtihfsrapirsagdvraadqqlkelfff
hmlrkgiylaprgmyalsleiadagrdafaealadfigeqrallm

    Sequence, based on observed residues (ATOM records):
    >2ykuA (A:)
asdtaekaqaiaaarntfardnpvsaghherarrsmpggntrsilfhrpfplviaqgtgs
rfqdvdghayvnflgeytaglfghshpviraaveralavglnlstqtenealfaeavcdr
fpsidlvrftnsgteanlmalatataitgrktvlafdggyhggllnfasghaptnapyhv
vlgvyndvegtadllkrhghdcaailvepmlgaggcvpaerafldllraeasrcgallif
devmtsrlsgggaqemlgisadlttlgkyigggmsfgafggrrdlmerfdpardgafaha
gtfnnniltmsaghaaltqiytrqaasdlsasgdrfranlnriavenqaplqftglgslg
tihfsrapirsagdvraadqqlkelfffhmlrkgiylaprgmyalsleiadagrdafaea
ladfigeqrallm

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2ykuB (B:)
mgsshhhhhhssglvprgshmnepigepgrspasdtaekaqaiaaarntfardnpvsagh
herarrsmpggntrsilfhrpfplviaqgtgsrfqdvdghayvnflgeytaglfghshpv
iraaveralavglnlstqtenealfaeavcdrfpsidlvrftnsgteanlmalatatait
grktvlafdggyhggllnfasghaptnapyhvvlgvyndvegtadllkrhghdcaailve
pmlgaggcvpaerafldllraeasrcgallifdevmtsrlsgggaqemlgisadlttlgk
yigggmsfgafggrrdlmerfdpardgafahagtfnnniltmsaghaaltqiytrqaasd
lsasgdrfranlnriavenqaplqftglgslgtihfsrapirsagdvraadqqlkelfff
hmlrkgiylaprgmyalsleiadagrdafaealadfigeqrallm

    Sequence, based on observed residues (ATOM records):
    >2ykuB (B:)
dtaekaqaiaaarntfardnpvsaghherarrsmpggntrsilfhrpfplviaqgtgsrf
qdvdghayvnflgeytaglfghshpviraaveralavglnlstqtenealfaeavcdrfp
sidlvrftnsgteanlmalatataitgrktvlafdggyhggllnfasghaptnapyhvvl
gvyndvegtadllkrhghdcaailvepmlgaggcvpaerafldllraeasrcgallifde
vmtsrlsgggaqemlgisadlttlgkyigggmsfgafggrrdlmerfdpardgafahagt
fnnniltmsaghaaltqiytrqaasdlsasgdrfranlnriavenqaplqftglgslgti
hfsrapirsagdvraadqqlkelfffhmlrkgiylaprgmyalsleiadagrdafaeala
dfigeqrall

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2ykuC (C:)
mgsshhhhhhssglvprgshmnepigepgrspasdtaekaqaiaaarntfardnpvsagh
herarrsmpggntrsilfhrpfplviaqgtgsrfqdvdghayvnflgeytaglfghshpv
iraaveralavglnlstqtenealfaeavcdrfpsidlvrftnsgteanlmalatatait
grktvlafdggyhggllnfasghaptnapyhvvlgvyndvegtadllkrhghdcaailve
pmlgaggcvpaerafldllraeasrcgallifdevmtsrlsgggaqemlgisadlttlgk
yigggmsfgafggrrdlmerfdpardgafahagtfnnniltmsaghaaltqiytrqaasd
lsasgdrfranlnriavenqaplqftglgslgtihfsrapirsagdvraadqqlkelfff
hmlrkgiylaprgmyalsleiadagrdafaealadfigeqrallm

    Sequence, based on observed residues (ATOM records):
    >2ykuC (C:)
asdtaekaqaiaaarntfardnpvsaghherarrsmpggntrsilfhrpfplviaqgtgs
rfqdvdghayvnflgeytaglfghshpviraaveralavglnlstqtenealfaeavcdr
fpsidlvrftnsgteanlmalatataitgrktvlafdggyhggllnfasghaptnapyhv
vlgvyndvegtadllkrhghdcaailvepmlgaggcvpaerafldllraeasrcgallif
devmtsrlsgggaqemlgisadlttlgkyigggmsfgafggrrdlmerfdpardgafaha
gtfnnniltmsaghaaltqiytrqaasdlsasgdrfranlnriavenqaplqftglgslg
tihfsrapirsagdvraadqqlkelfffhmlrkgiylaprgmyalsleiadagrdafaea
ladfigeqrall