PDB entry 2yk7

View 2yk7 on RCSB PDB site
Description: structure of neisseria los-specific sialyltransferase (nst), in complex with cmp-3f-neu5ac.
Deposited on 2011-05-25, released 2011-08-31
The last revision was dated 2019-09-25, with a file datestamp of 2019-09-20.
Experiment type: XRAY
Resolution: 2.18 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: cmp-n-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase
    Species: NEISSERIA MENINGITIDIS SEROGROUP B [TaxId:491]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P72097 (0-321)
      • conflict (36)
      • variant (53)
      • variant (80)
      • variant (119)
      • variant (193)
      • variant (224)
  • Heterogens: CSF, 1PE, EDO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2yk7A (A:)
pvnlifcytilqmkvaerimaqhpgerfyvvlmsennnekydyyfnqikdkaewayffhl
pyglnksfnfiptmaelkvkamllpkvkriylaslekvsiaaflstypdaeiktfddgti
nliqsssylgdefsvngtikrnfarmmigdwsiaktrnasdehytifkglknimddgrrk
mtylplfdaselkagdetggtvrillgspdkemkeisekaaknfniqyvaphprqtygls
gvttlnspyviedyilreikknphtryeiytffsgaaltmkdfpnvhvyalkpaslpedy
wlkpvyalftqsgipiltfddklvpr

    Sequence, based on observed residues (ATOM records):
    >2yk7A (A:)
pvnlifcytilqmkvaerimaqhpgerfyvvlmsennnekydyyfnqikdkaewayffhl
pyglnksfnfiptmaelkvkamllpkvkriylaslekvsiaaflstypdaeiktfddgti
nliqsssylgdefsvngtikrnfarmmigdwsiaktrnasdehytifkglknimddgrrk
mtylplfdaselkagdetggtvrillgspdkemkeisekaaknfniqyvaphprqtygls
gvttlnspyviedyilreikknphtryeiytffsgaaltmkdfpnvhvyalkpaslpedy
wlkpvyalftqsgipiltfddk