PDB entry 2yk0

View 2yk0 on RCSB PDB site
Description: structure of the n-terminal nts-dbl1-alpha and cidr-gamma double domain of the pfemp1 protein from plasmodium falciparum varo strain.
Deposited on 2011-05-25, released 2012-05-30
The last revision was dated 2019-03-06, with a file datestamp of 2019-03-01.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Erythrocyte membrane protein 1
    Species: PLASMODIUM FALCIPARUM [TaxId:5833]
    Database cross-references and differences (RAF-indexed):
    • Uniprot B7T1P0
      • engineered mutation (127)
      • engineered mutation (130)
      • engineered mutation (156)
      • engineered mutation (188)
      • engineered mutation (252)
      • engineered mutation (362)
      • engineered mutation (659)
  • Heterogens: MG, SO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2yk0A (A:)
isefgsshstndaksptlseshksarnvlenigikiynqeikkknpyeqqlkgtlsraqf
vdalssrygyvrnsdgnscnldhlfhtniktgynegrkpcygreqnrfdenaeaycnsdk
irgnennangaacapprrrhicdqnlefldnkntntahdllgnvlvtakyegnyivndhp
dknsngnkagictslarsfadigdivrgrdmflpnkddkvqkglqvvfkkiyksltpear
khyahgdgsgnyaklredwwtinreqiwkaltcsapyyadyfrkgsdgtlhfsshgkcgh
negapptyldyvpqflrwfeewseefcrikkikidkvkkecrdeqnkkycsgdghdctqt
nlahnqifvdldcprcqdqcikynewivkkleefykqnlkysmeiqkwkktknnyydkef
yenldkksystidkflnllnngkhchdnkdeknkidfnkpiktfsiseycktcplygvtc
tnrgicihnsnnknkgendlnkinikdkspttfdvdmiylrrqymknelksfvestclfk
gmrnqewtcqilknldvcklnnfnkvididkhitfkvllerwlkdflegykkskrkinpc
tkdknsciklcinkctcveewlnkkekewgqikkhfnkqfhgegydiafkvksyfednea
dvrksidnfhvlknkeeyeicnvddncrsqnnkkkkdivtillkelkdkivscknqhkat
kgkeccdklpkiadgdtsddeeqedeapappkpkppstpnpcvrkdqsgthivsvedvae
wmqgvthdrv

    Sequence, based on observed residues (ATOM records):
    >2yk0A (A:)
hksarnvlenigikiynqeikkknpyeqqlkgtlsraqfvdalssrygyvrnsdgnscnl
dhlfhtniktgynegrkpcygreqnrfdenaeaycnsdkirgnennangaacapprrrhi
cdqnlefldnkntntahdllgnvlvtakyegnyivndhpdknsngnkagictslarsfad
igdivrgrdmflpnkddkvqkglqvvfkkiyksltpearkhyahgdgsgnyaklredwwt
inreqiwkaltcsapyyadyfrkgsdgtlhfsshgkcghnegapptyldyvpqflrwfee
wseefcrikkikidkvkkecrdeqnkkycsgdghdctqtnlahnqifvdldcprcqdqci
kynewivkkleefykqnlkysmeiqkwkktknnyydkefyenldkksystidkflnllnn
gkhchdnkdeknkidfnkpiktfsiseycktcplygvtctnrgicihnsnnknkgendln
kinikdkspttfdvdmiylrrqymknelksfvestclfkgmrnqewtcqilknldvckln
nfnkvididkhitfkvllerwlkdflegykkskrkinpctkdknsciklcinkctcveew
lnkkekewgqikkhfnkqfhgegydiafkvksyfedneadvrksidnfhvlknkeeyeic
nvddncrsqnnkkkkdivtillkelkdkivscknqhka