PDB entry 2yjv

View 2yjv on RCSB PDB site
Description: crystal structure of e. coli regulator of ribonuclease activity a (rraa) bound to fragment of dead-box protein rhlb
Deposited on 2011-05-24, released 2012-06-06
The last revision was dated 2019-02-27, with a file datestamp of 2019-02-22.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Regulator of ribonuclease activity A
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Regulator of ribonuclease activity A
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Regulator of ribonuclease activity A
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Regulator of ribonuclease activity A
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Regulator of ribonuclease activity A
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Regulator of ribonuclease activity A
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Regulator of ribonuclease activity A
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Regulator of ribonuclease activity A
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: Regulator of ribonuclease activity A
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: Regulator of ribonuclease activity A
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: Regulator of ribonuclease activity A
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
  • Chain 'L':
    Compound: Regulator of ribonuclease activity A
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
  • Chain 'M':
    Compound: ATP-dependent RNA helicase rhlb
    Species: Escherichia coli, synthetic [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
    • PDB 2YJV (0-End)
  • Chain 'N':
    Compound: ATP-dependent RNA helicase rhlb
    Species: Escherichia coli, synthetic [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
    • PDB 2YJV (0-8)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2yjvA (A:)
mkydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrv
lvvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaa
gegigesdvrvnfggvtffsgdhlyadntgiilsedpldie

    Sequence, based on observed residues (ATOM records):
    >2yjvA (A:)
kydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrvl
vvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaag
egigesdvrvnfggvtffsgdhlyadntgiilsedpld

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2yjvB (B:)
mkydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrv
lvvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaa
gegigesdvrvnfggvtffsgdhlyadntgiilsedpldie

    Sequence, based on observed residues (ATOM records):
    >2yjvB (B:)
kydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrvl
vvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaag
egigesdvrvnfggvtffsgdhlyadntgiilsedpld

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2yjvC (C:)
mkydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrv
lvvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaa
gegigesdvrvnfggvtffsgdhlyadntgiilsedpldie

    Sequence, based on observed residues (ATOM records):
    >2yjvC (C:)
kydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrvl
vvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaag
egigesdvrvnfggvtffsgdhlyadntgiilsedpld

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2yjvD (D:)
mkydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrv
lvvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaa
gegigesdvrvnfggvtffsgdhlyadntgiilsedpldie

    Sequence, based on observed residues (ATOM records):
    >2yjvD (D:)
kydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrvl
vvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaag
egigesdvrvnfggvtffsgdhlyadntgiilsedpl

  • Chain 'E':
    Sequence, based on SEQRES records:
    >2yjvE (E:)
mkydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrv
lvvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaa
gegigesdvrvnfggvtffsgdhlyadntgiilsedpldie

    Sequence, based on observed residues (ATOM records):
    >2yjvE (E:)
kydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrvl
vvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaag
egigesdvrvnfggvtffsgdhlyadntgiilsedpld

  • Chain 'F':
    Sequence, based on SEQRES records:
    >2yjvF (F:)
mkydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrv
lvvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaa
gegigesdvrvnfggvtffsgdhlyadntgiilsedpldie

    Sequence, based on observed residues (ATOM records):
    >2yjvF (F:)
kydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrvl
vvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaag
egigesdvrvnfggvtffsgdhlyadntgiilsedpl

  • Chain 'G':
    Sequence, based on SEQRES records:
    >2yjvG (G:)
mkydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrv
lvvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaa
gegigesdvrvnfggvtffsgdhlyadntgiilsedpldie

    Sequence, based on observed residues (ATOM records):
    >2yjvG (G:)
kydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrvl
vvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaag
egigesdvrvnfggvtffsgdhlyadntgiilsedpld

  • Chain 'H':
    Sequence, based on SEQRES records:
    >2yjvH (H:)
mkydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrv
lvvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaa
gegigesdvrvnfggvtffsgdhlyadntgiilsedpldie

    Sequence, based on observed residues (ATOM records):
    >2yjvH (H:)
kydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrvl
vvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaag
egigesdvrvnfggvtffsgdhlyadntgiilsedpld

  • Chain 'I':
    Sequence, based on SEQRES records:
    >2yjvI (I:)
mkydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrv
lvvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaa
gegigesdvrvnfggvtffsgdhlyadntgiilsedpldie

    Sequence, based on observed residues (ATOM records):
    >2yjvI (I:)
kydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrvl
vvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaag
egigesdvrvnfggvtffsgdhlyadntgiilsedpl

  • Chain 'J':
    Sequence, based on SEQRES records:
    >2yjvJ (J:)
mkydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrv
lvvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaa
gegigesdvrvnfggvtffsgdhlyadntgiilsedpldie

    Sequence, based on observed residues (ATOM records):
    >2yjvJ (J:)
kydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrvl
vvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaag
egigesdvrvnfggvtffsgdhlyadntgiilsedpld

  • Chain 'K':
    Sequence, based on SEQRES records:
    >2yjvK (K:)
mkydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrv
lvvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaa
gegigesdvrvnfggvtffsgdhlyadntgiilsedpldie

    Sequence, based on observed residues (ATOM records):
    >2yjvK (K:)
kydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrvl
vvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaag
egigesdvrvnfggvtffsgdhlyadntgiilsedpld

  • Chain 'L':
    Sequence, based on SEQRES records:
    >2yjvL (L:)
mkydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrv
lvvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaa
gegigesdvrvnfggvtffsgdhlyadntgiilsedpldie

    Sequence, based on observed residues (ATOM records):
    >2yjvL (L:)
kydtselcdiyqedvnvveplfsnfggrasfggqiitvkcfedngllydlleqngrgrvl
vvdgggsvrralvdaelarlavqneweglviygavrqvddleeldigiqamaaipvgaag
egigesdvrvnfggvtffsgdhlyadntgiilsed

  • Chain 'M':
    Sequence, based on SEQRES records:
    >2yjvM (M:)
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    Sequence, based on observed residues (ATOM records):
    >2yjvM (M:)
xxxxxx

  • Chain 'N':
    Sequence; same for both SEQRES and ATOM records:
    >2yjvN (N:)
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