PDB entry 2yjp

View 2yjp on RCSB PDB site
Description: Crystal structure of the solute receptors for L-cysteine of Neisseria gonorrhoeae
Class: transport protein
Keywords: transport protein, solute-binding protein
Deposited on 2011-05-23, released 2011-12-14
The last revision prior to the SCOPe 2.08 freeze date was dated 2012-01-25, with a file datestamp of 2012-01-20.
Experiment type: XRAY
Resolution: 2.26 Å
R-factor: 0.18713
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: putative abc transporter, periplasmic binding protein, amino acid
    Species: Neisseria gonorrhoeae [TaxId:242231]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yjpa_
  • Chain 'B':
    Compound: putative abc transporter, periplasmic binding protein, amino acid
    Species: Neisseria gonorrhoeae [TaxId:242231]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yjpb_
  • Chain 'C':
    Compound: putative abc transporter, periplasmic binding protein, amino acid
    Species: Neisseria gonorrhoeae [TaxId:242231]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yjpc_
  • Heterogens: CYS, ZN, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2yjpA (A:)
    mghhhhhhhhhhssghiddddkhmvgltaagggsgdaqssqssgaatvaaikekgvirig
    vfgdkppfgyvdangknqgfdveiakdlakdllgspdkvefvlteaanrveyvrsgkvdl
    ilanftqtperaeavdfadpymkvalgvvspknkpitdmaqlkdqtllvnkgttadafft
    kshpevkllkfdqntetfdalkdgrgvalahdnallwawakenpnfevaignlgpaefia
    pavqkgnadllnwvngeiaamkkdgrlkaayektllpvygekvkpeallae
    

    Sequence, based on observed residues (ATOM records): (download)
    >2yjpA (A:)
    aatvaaikekgvirigvfgdkppfgyvdangknqgfdveiakdlakdllgspdkvefvlt
    eaanrveyvrsgkvdlilanftqtperaeavdfadpymkvalgvvspknkpitdmaqlkd
    qtllvnkgttadafftkshpevkllkfdqntetfdalkdgrgvalahdnallwawakenp
    nfevaignlgpaefiapavqkgnadllnwvngeiaamkkdgrlkaayektllpvygekvk
    peallae
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2yjpB (B:)
    mghhhhhhhhhhssghiddddkhmvgltaagggsgdaqssqssgaatvaaikekgvirig
    vfgdkppfgyvdangknqgfdveiakdlakdllgspdkvefvlteaanrveyvrsgkvdl
    ilanftqtperaeavdfadpymkvalgvvspknkpitdmaqlkdqtllvnkgttadafft
    kshpevkllkfdqntetfdalkdgrgvalahdnallwawakenpnfevaignlgpaefia
    pavqkgnadllnwvngeiaamkkdgrlkaayektllpvygekvkpeallae
    

    Sequence, based on observed residues (ATOM records): (download)
    >2yjpB (B:)
    atvaaikekgvirigvfgdkppfgyvdangknqgfdveiakdlakdllgspdkvefvlte
    aanrveyvrsgkvdlilanftqtperaeavdfadpymkvalgvvspknkpitdmaqlkdq
    tllvnkgttadafftkshpevkllkfdqntetfdalkdgrgvalahdnallwawakenpn
    fevaignlgpaefiapavqkgnadllnwvngeiaamkkdgrlkaayektllpvygekvkp
    eallae
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >2yjpC (C:)
    mghhhhhhhhhhssghiddddkhmvgltaagggsgdaqssqssgaatvaaikekgvirig
    vfgdkppfgyvdangknqgfdveiakdlakdllgspdkvefvlteaanrveyvrsgkvdl
    ilanftqtperaeavdfadpymkvalgvvspknkpitdmaqlkdqtllvnkgttadafft
    kshpevkllkfdqntetfdalkdgrgvalahdnallwawakenpnfevaignlgpaefia
    pavqkgnadllnwvngeiaamkkdgrlkaayektllpvygekvkpeallae
    

    Sequence, based on observed residues (ATOM records): (download)
    >2yjpC (C:)
    atvaaikekgvirigvfgdkppfgyvdangknqgfdveiakdlakdllgspdkvefvlte
    aanrveyvrsgkvdlilanftqtperaeavdfadpymkvalgvvspknkpitdmaqlkdq
    tllvnkgttadafftkshpevkllkfdqntetfdalkdgrgvalahdnallwawakenpn
    fevaignlgpaefiapavqkgnadllnwvngeiaamkkdgrlkaayektllpvygekvkp
    eallae