PDB entry 2yjn

View 2yjn on RCSB PDB site
Description: structure of the glycosyltransferase eryciii from the erythromycin biosynthetic pathway, in complex with its activating partner, erycii
Deposited on 2011-05-20, released 2011-11-09
The last revision was dated 2015-04-01, with a file datestamp of 2015-03-27.
Experiment type: XRAY
Resolution: 3.09 Å
R-factor: N/A
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: glycosyltransferase
    Species: SACCHAROPOLYSPORA ERYTHRAEA [TaxId:405948]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O54224 (20-End)
      • expression tag (18-19)
  • Chain 'B':
    Compound: dtdp-4-keto-6-deoxy-hexose 3,4-isomerase
    Species: SACCHAROPOLYSPORA ERYTHRAEA [TaxId:405948]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O54225 (20-End)
      • expression tag (19)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2yjnA (A:)
    mgsshhhhhhssglvprgshmrvvfssmaskshlfglvplawafraaghevrvvaspalt
    editaagltavpvgtdvdlvdfmthaghdiidyvrsldfserdpatltwehllgmqtvlt
    ptfyalmspdtliegmvsfcrkwrpdlviwepltfaapiaaavtgtpharllwgpdittr
    arqnflgllpdqpeehredplaewltwtlekyggpafdeevvvgqwtidpapaairldtg
    lktvgmryvdyngpsvvpewlhdeperrrvcltlgissrensigqvsieellgavgdvda
    eiiatfdaqqlegvanipdnvrtvgfvpmhallptcaatvhhggpgswhtaaihgvpqvi
    lpdgwdtgvraqrtqefgagialpvpeltpdqlresvkrvlddpahragaarmrddmlae
    pspaevvgiceelaagrrepr
    

    Sequence, based on observed residues (ATOM records):
    >2yjnA (A:)
    shmrvvfssmaskshlfglvplawafraaghevrvvaspalteditaagltavpvgtdvd
    lvdfmthaghdiidyvrsldfserdpatltwehllgmqtvltptfyalmspdtliegmvs
    fcrkwrpdlviwepltfaapiaaavtgtpharllwgpdittrarqnflgllpdqpeehre
    dplaewltwtlekyggpafdeevvvgqwtidpapaairldtglktvgmryvdyngpsvvp
    ewlhdeperrrvcltlqvsieellgavgdvdaeiiatfdaqqlegvanipdnvrtvgfvp
    mhallptcaatvhhggpgswhtaaihgvpqvilpdgwdtgvraqrtqefgagialpvpel
    tpdqlresvkrvlddpahragaarmrddmlaepspaevvgiceelaag
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2yjnB (B:)
    mgsshhhhhhssglvprgshmtttdraglgrqlqmirglhwgygsngdpypmllcghddd
    pqrryrsmresgvrrsrtetwvvadhatarqvlddpaftratgrtpewmraagappaewa
    qpfrdvhaaswegevpdvgelaesfagllpgagarldlvgdfawqvpvqgmtavlgaagv
    lrgaawdarvsldaqlspqqlavteaavaalpadpalralfagaemtantvvdavlavsa
    epglaeriaddpaaaqrtvaevlrlhpalhlerrtataevrlgehvigegeevvvvvaaa
    nrdpevfaepdrldvdrpdadralsahrghpgrleelvtalataalraaakalpgltpsg
    pvvrrrrspvlrgtnrcpvel
    

    Sequence, based on observed residues (ATOM records):
    >2yjnB (B:)
    hmtttdraglgrqlqmirglhwgygsngdpypmllcghdddpqrryrsmresgvrrsrte
    twvvadhatarqvlddpaftratgrtpewmraagappaewaqpfrdvhaaswegevpdvg
    elaesfagllpglvgdfawqvpvqgmtavvlrgaawdarvsldaqlspqqlavteaavaa
    lppalralfagaemtantvvdavlavsaepglaeriaddpaqrtvaevlrlhpalhlerr
    tataevrlgehvigegeevvvvvaaanrdpevfaepdrldvdrpdadralshpgrleelv
    talataalraaakalpgpvvrrrrspvlrgtnrcpve