PDB entry 2yi3

View 2yi3 on RCSB PDB site
Description: Grapevine Fanleaf virus
Deposited on 2011-05-10, released 2011-11-16
The last revision was dated 2014-12-10, with a file datestamp of 2014-12-05.
Experiment type: XRAY
Resolution: 3.7 Å
R-factor: 0.2323
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: coat protein
    Species: GRAPEVINE FANLEAF VIRUS [TaxId:12274]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: coat protein
    Species: GRAPEVINE FANLEAF VIRUS [TaxId:12274]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: coat protein
    Species: GRAPEVINE FANLEAF VIRUS [TaxId:12274]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: coat protein
    Species: GRAPEVINE FANLEAF VIRUS [TaxId:12274]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: coat protein
    Species: GRAPEVINE FANLEAF VIRUS [TaxId:12274]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: coat protein
    Species: GRAPEVINE FANLEAF VIRUS [TaxId:12274]
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: coat protein
    Species: GRAPEVINE FANLEAF VIRUS [TaxId:12274]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: coat protein
    Species: GRAPEVINE FANLEAF VIRUS [TaxId:12274]
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: coat protein
    Species: GRAPEVINE FANLEAF VIRUS [TaxId:12274]
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: coat protein
    Species: GRAPEVINE FANLEAF VIRUS [TaxId:12274]
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: coat protein
    Species: GRAPEVINE FANLEAF VIRUS [TaxId:12274]
    Database cross-references and differences (RAF-indexed):
  • Chain 'L':
    Compound: coat protein
    Species: GRAPEVINE FANLEAF VIRUS [TaxId:12274]
    Database cross-references and differences (RAF-indexed):
  • Chain 'M':
    Compound: coat protein
    Species: GRAPEVINE FANLEAF VIRUS [TaxId:12274]
    Database cross-references and differences (RAF-indexed):
  • Chain 'N':
    Compound: coat protein
    Species: GRAPEVINE FANLEAF VIRUS [TaxId:12274]
    Database cross-references and differences (RAF-indexed):
  • Chain 'O':
    Compound: coat protein
    Species: GRAPEVINE FANLEAF VIRUS [TaxId:12274]
    Database cross-references and differences (RAF-indexed):
  • Chain 'P':
    Compound: coat protein
    Species: GRAPEVINE FANLEAF VIRUS [TaxId:12274]
    Database cross-references and differences (RAF-indexed):
  • Chain 'Q':
    Compound: coat protein
    Species: GRAPEVINE FANLEAF VIRUS [TaxId:12274]
    Database cross-references and differences (RAF-indexed):
  • Chain 'R':
    Compound: coat protein
    Species: GRAPEVINE FANLEAF VIRUS [TaxId:12274]
    Database cross-references and differences (RAF-indexed):
  • Chain 'S':
    Compound: coat protein
    Species: GRAPEVINE FANLEAF VIRUS [TaxId:12274]
    Database cross-references and differences (RAF-indexed):
  • Chain 'T':
    Compound: coat protein
    Species: GRAPEVINE FANLEAF VIRUS [TaxId:12274]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >2yi3A (A:)
glagrgviyipkdcqanrylgtlnirdmisdfkgvqyekwitaglvmptfkivirlpana
ftgltwvmsfdaynritsritasadpvytlsvphwlihhklgtfsceidygelcghamwf
ksttfesprlhftcltgnnkelaadwqavvelyaeleeatsflgkptlvfdpgvfngkfq
fltcppiffdltavtalrsagltlgqvpmvgttkvynlnstlvscvlgmggtvrgrvhic
apifysivlwvvsewngttmdwnelfkypgvyveedgsfevkirspyhrtparllagqsq
rdmsslnfyaiagpiapsgetaqlpivvqideivrpdlslpsfeddyfvwvdfseftldk
eeieigsrffdftsntcrvsmgenpfaamiachglhsgvldlklqwslntefgkssgsvt
itklvgdkamgldgpshvfaiqklegttellvgnfaganpntrfslysrwmaikldqaks
ikvlrvlckprpgfsfygrtsfpv

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >2yi3B (B:)
glagrgviyipkdcqanrylgtlnirdmisdfkgvqyekwitaglvmptfkivirlpana
ftgltwvmsfdaynritsritasadpvytlsvphwlihhklgtfsceidygelcghamwf
ksttfesprlhftcltgnnkelaadwqavvelyaeleeatsflgkptlvfdpgvfngkfq
fltcppiffdltavtalrsagltlgqvpmvgttkvynlnstlvscvlgmggtvrgrvhic
apifysivlwvvsewngttmdwnelfkypgvyveedgsfevkirspyhrtparllagqsq
rdmsslnfyaiagpiapsgetaqlpivvqideivrpdlslpsfeddyfvwvdfseftldk
eeieigsrffdftsntcrvsmgenpfaamiachglhsgvldlklqwslntefgkssgsvt
itklvgdkamgldgpshvfaiqklegttellvgnfaganpntrfslysrwmaikldqaks
ikvlrvlckprpgfsfygrtsfpv

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >2yi3C (C:)
glagrgviyipkdcqanrylgtlnirdmisdfkgvqyekwitaglvmptfkivirlpana
ftgltwvmsfdaynritsritasadpvytlsvphwlihhklgtfsceidygelcghamwf
ksttfesprlhftcltgnnkelaadwqavvelyaeleeatsflgkptlvfdpgvfngkfq
fltcppiffdltavtalrsagltlgqvpmvgttkvynlnstlvscvlgmggtvrgrvhic
apifysivlwvvsewngttmdwnelfkypgvyveedgsfevkirspyhrtparllagqsq
rdmsslnfyaiagpiapsgetaqlpivvqideivrpdlslpsfeddyfvwvdfseftldk
eeieigsrffdftsntcrvsmgenpfaamiachglhsgvldlklqwslntefgkssgsvt
itklvgdkamgldgpshvfaiqklegttellvgnfaganpntrfslysrwmaikldqaks
ikvlrvlckprpgfsfygrtsfpv

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >2yi3D (D:)
glagrgviyipkdcqanrylgtlnirdmisdfkgvqyekwitaglvmptfkivirlpana
ftgltwvmsfdaynritsritasadpvytlsvphwlihhklgtfsceidygelcghamwf
ksttfesprlhftcltgnnkelaadwqavvelyaeleeatsflgkptlvfdpgvfngkfq
fltcppiffdltavtalrsagltlgqvpmvgttkvynlnstlvscvlgmggtvrgrvhic
apifysivlwvvsewngttmdwnelfkypgvyveedgsfevkirspyhrtparllagqsq
rdmsslnfyaiagpiapsgetaqlpivvqideivrpdlslpsfeddyfvwvdfseftldk
eeieigsrffdftsntcrvsmgenpfaamiachglhsgvldlklqwslntefgkssgsvt
itklvgdkamgldgpshvfaiqklegttellvgnfaganpntrfslysrwmaikldqaks
ikvlrvlckprpgfsfygrtsfpv

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >2yi3E (E:)
glagrgviyipkdcqanrylgtlnirdmisdfkgvqyekwitaglvmptfkivirlpana
ftgltwvmsfdaynritsritasadpvytlsvphwlihhklgtfsceidygelcghamwf
ksttfesprlhftcltgnnkelaadwqavvelyaeleeatsflgkptlvfdpgvfngkfq
fltcppiffdltavtalrsagltlgqvpmvgttkvynlnstlvscvlgmggtvrgrvhic
apifysivlwvvsewngttmdwnelfkypgvyveedgsfevkirspyhrtparllagqsq
rdmsslnfyaiagpiapsgetaqlpivvqideivrpdlslpsfeddyfvwvdfseftldk
eeieigsrffdftsntcrvsmgenpfaamiachglhsgvldlklqwslntefgkssgsvt
itklvgdkamgldgpshvfaiqklegttellvgnfaganpntrfslysrwmaikldqaks
ikvlrvlckprpgfsfygrtsfpv

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >2yi3F (F:)
glagrgviyipkdcqanrylgtlnirdmisdfkgvqyekwitaglvmptfkivirlpana
ftgltwvmsfdaynritsritasadpvytlsvphwlihhklgtfsceidygelcghamwf
ksttfesprlhftcltgnnkelaadwqavvelyaeleeatsflgkptlvfdpgvfngkfq
fltcppiffdltavtalrsagltlgqvpmvgttkvynlnstlvscvlgmggtvrgrvhic
apifysivlwvvsewngttmdwnelfkypgvyveedgsfevkirspyhrtparllagqsq
rdmsslnfyaiagpiapsgetaqlpivvqideivrpdlslpsfeddyfvwvdfseftldk
eeieigsrffdftsntcrvsmgenpfaamiachglhsgvldlklqwslntefgkssgsvt
itklvgdkamgldgpshvfaiqklegttellvgnfaganpntrfslysrwmaikldqaks
ikvlrvlckprpgfsfygrtsfpv

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >2yi3G (G:)
glagrgviyipkdcqanrylgtlnirdmisdfkgvqyekwitaglvmptfkivirlpana
ftgltwvmsfdaynritsritasadpvytlsvphwlihhklgtfsceidygelcghamwf
ksttfesprlhftcltgnnkelaadwqavvelyaeleeatsflgkptlvfdpgvfngkfq
fltcppiffdltavtalrsagltlgqvpmvgttkvynlnstlvscvlgmggtvrgrvhic
apifysivlwvvsewngttmdwnelfkypgvyveedgsfevkirspyhrtparllagqsq
rdmsslnfyaiagpiapsgetaqlpivvqideivrpdlslpsfeddyfvwvdfseftldk
eeieigsrffdftsntcrvsmgenpfaamiachglhsgvldlklqwslntefgkssgsvt
itklvgdkamgldgpshvfaiqklegttellvgnfaganpntrfslysrwmaikldqaks
ikvlrvlckprpgfsfygrtsfpv

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >2yi3H (H:)
glagrgviyipkdcqanrylgtlnirdmisdfkgvqyekwitaglvmptfkivirlpana
ftgltwvmsfdaynritsritasadpvytlsvphwlihhklgtfsceidygelcghamwf
ksttfesprlhftcltgnnkelaadwqavvelyaeleeatsflgkptlvfdpgvfngkfq
fltcppiffdltavtalrsagltlgqvpmvgttkvynlnstlvscvlgmggtvrgrvhic
apifysivlwvvsewngttmdwnelfkypgvyveedgsfevkirspyhrtparllagqsq
rdmsslnfyaiagpiapsgetaqlpivvqideivrpdlslpsfeddyfvwvdfseftldk
eeieigsrffdftsntcrvsmgenpfaamiachglhsgvldlklqwslntefgkssgsvt
itklvgdkamgldgpshvfaiqklegttellvgnfaganpntrfslysrwmaikldqaks
ikvlrvlckprpgfsfygrtsfpv

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records:
    >2yi3I (I:)
glagrgviyipkdcqanrylgtlnirdmisdfkgvqyekwitaglvmptfkivirlpana
ftgltwvmsfdaynritsritasadpvytlsvphwlihhklgtfsceidygelcghamwf
ksttfesprlhftcltgnnkelaadwqavvelyaeleeatsflgkptlvfdpgvfngkfq
fltcppiffdltavtalrsagltlgqvpmvgttkvynlnstlvscvlgmggtvrgrvhic
apifysivlwvvsewngttmdwnelfkypgvyveedgsfevkirspyhrtparllagqsq
rdmsslnfyaiagpiapsgetaqlpivvqideivrpdlslpsfeddyfvwvdfseftldk
eeieigsrffdftsntcrvsmgenpfaamiachglhsgvldlklqwslntefgkssgsvt
itklvgdkamgldgpshvfaiqklegttellvgnfaganpntrfslysrwmaikldqaks
ikvlrvlckprpgfsfygrtsfpv

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records:
    >2yi3J (J:)
glagrgviyipkdcqanrylgtlnirdmisdfkgvqyekwitaglvmptfkivirlpana
ftgltwvmsfdaynritsritasadpvytlsvphwlihhklgtfsceidygelcghamwf
ksttfesprlhftcltgnnkelaadwqavvelyaeleeatsflgkptlvfdpgvfngkfq
fltcppiffdltavtalrsagltlgqvpmvgttkvynlnstlvscvlgmggtvrgrvhic
apifysivlwvvsewngttmdwnelfkypgvyveedgsfevkirspyhrtparllagqsq
rdmsslnfyaiagpiapsgetaqlpivvqideivrpdlslpsfeddyfvwvdfseftldk
eeieigsrffdftsntcrvsmgenpfaamiachglhsgvldlklqwslntefgkssgsvt
itklvgdkamgldgpshvfaiqklegttellvgnfaganpntrfslysrwmaikldqaks
ikvlrvlckprpgfsfygrtsfpv

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records:
    >2yi3K (K:)
glagrgviyipkdcqanrylgtlnirdmisdfkgvqyekwitaglvmptfkivirlpana
ftgltwvmsfdaynritsritasadpvytlsvphwlihhklgtfsceidygelcghamwf
ksttfesprlhftcltgnnkelaadwqavvelyaeleeatsflgkptlvfdpgvfngkfq
fltcppiffdltavtalrsagltlgqvpmvgttkvynlnstlvscvlgmggtvrgrvhic
apifysivlwvvsewngttmdwnelfkypgvyveedgsfevkirspyhrtparllagqsq
rdmsslnfyaiagpiapsgetaqlpivvqideivrpdlslpsfeddyfvwvdfseftldk
eeieigsrffdftsntcrvsmgenpfaamiachglhsgvldlklqwslntefgkssgsvt
itklvgdkamgldgpshvfaiqklegttellvgnfaganpntrfslysrwmaikldqaks
ikvlrvlckprpgfsfygrtsfpv

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >2yi3L (L:)
glagrgviyipkdcqanrylgtlnirdmisdfkgvqyekwitaglvmptfkivirlpana
ftgltwvmsfdaynritsritasadpvytlsvphwlihhklgtfsceidygelcghamwf
ksttfesprlhftcltgnnkelaadwqavvelyaeleeatsflgkptlvfdpgvfngkfq
fltcppiffdltavtalrsagltlgqvpmvgttkvynlnstlvscvlgmggtvrgrvhic
apifysivlwvvsewngttmdwnelfkypgvyveedgsfevkirspyhrtparllagqsq
rdmsslnfyaiagpiapsgetaqlpivvqideivrpdlslpsfeddyfvwvdfseftldk
eeieigsrffdftsntcrvsmgenpfaamiachglhsgvldlklqwslntefgkssgsvt
itklvgdkamgldgpshvfaiqklegttellvgnfaganpntrfslysrwmaikldqaks
ikvlrvlckprpgfsfygrtsfpv

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records:
    >2yi3M (M:)
glagrgviyipkdcqanrylgtlnirdmisdfkgvqyekwitaglvmptfkivirlpana
ftgltwvmsfdaynritsritasadpvytlsvphwlihhklgtfsceidygelcghamwf
ksttfesprlhftcltgnnkelaadwqavvelyaeleeatsflgkptlvfdpgvfngkfq
fltcppiffdltavtalrsagltlgqvpmvgttkvynlnstlvscvlgmggtvrgrvhic
apifysivlwvvsewngttmdwnelfkypgvyveedgsfevkirspyhrtparllagqsq
rdmsslnfyaiagpiapsgetaqlpivvqideivrpdlslpsfeddyfvwvdfseftldk
eeieigsrffdftsntcrvsmgenpfaamiachglhsgvldlklqwslntefgkssgsvt
itklvgdkamgldgpshvfaiqklegttellvgnfaganpntrfslysrwmaikldqaks
ikvlrvlckprpgfsfygrtsfpv

  • Chain 'N':
    Sequence; same for both SEQRES and ATOM records:
    >2yi3N (N:)
glagrgviyipkdcqanrylgtlnirdmisdfkgvqyekwitaglvmptfkivirlpana
ftgltwvmsfdaynritsritasadpvytlsvphwlihhklgtfsceidygelcghamwf
ksttfesprlhftcltgnnkelaadwqavvelyaeleeatsflgkptlvfdpgvfngkfq
fltcppiffdltavtalrsagltlgqvpmvgttkvynlnstlvscvlgmggtvrgrvhic
apifysivlwvvsewngttmdwnelfkypgvyveedgsfevkirspyhrtparllagqsq
rdmsslnfyaiagpiapsgetaqlpivvqideivrpdlslpsfeddyfvwvdfseftldk
eeieigsrffdftsntcrvsmgenpfaamiachglhsgvldlklqwslntefgkssgsvt
itklvgdkamgldgpshvfaiqklegttellvgnfaganpntrfslysrwmaikldqaks
ikvlrvlckprpgfsfygrtsfpv

  • Chain 'O':
    Sequence; same for both SEQRES and ATOM records:
    >2yi3O (O:)
glagrgviyipkdcqanrylgtlnirdmisdfkgvqyekwitaglvmptfkivirlpana
ftgltwvmsfdaynritsritasadpvytlsvphwlihhklgtfsceidygelcghamwf
ksttfesprlhftcltgnnkelaadwqavvelyaeleeatsflgkptlvfdpgvfngkfq
fltcppiffdltavtalrsagltlgqvpmvgttkvynlnstlvscvlgmggtvrgrvhic
apifysivlwvvsewngttmdwnelfkypgvyveedgsfevkirspyhrtparllagqsq
rdmsslnfyaiagpiapsgetaqlpivvqideivrpdlslpsfeddyfvwvdfseftldk
eeieigsrffdftsntcrvsmgenpfaamiachglhsgvldlklqwslntefgkssgsvt
itklvgdkamgldgpshvfaiqklegttellvgnfaganpntrfslysrwmaikldqaks
ikvlrvlckprpgfsfygrtsfpv

  • Chain 'P':
    Sequence; same for both SEQRES and ATOM records:
    >2yi3P (P:)
glagrgviyipkdcqanrylgtlnirdmisdfkgvqyekwitaglvmptfkivirlpana
ftgltwvmsfdaynritsritasadpvytlsvphwlihhklgtfsceidygelcghamwf
ksttfesprlhftcltgnnkelaadwqavvelyaeleeatsflgkptlvfdpgvfngkfq
fltcppiffdltavtalrsagltlgqvpmvgttkvynlnstlvscvlgmggtvrgrvhic
apifysivlwvvsewngttmdwnelfkypgvyveedgsfevkirspyhrtparllagqsq
rdmsslnfyaiagpiapsgetaqlpivvqideivrpdlslpsfeddyfvwvdfseftldk
eeieigsrffdftsntcrvsmgenpfaamiachglhsgvldlklqwslntefgkssgsvt
itklvgdkamgldgpshvfaiqklegttellvgnfaganpntrfslysrwmaikldqaks
ikvlrvlckprpgfsfygrtsfpv

  • Chain 'Q':
    Sequence; same for both SEQRES and ATOM records:
    >2yi3Q (Q:)
glagrgviyipkdcqanrylgtlnirdmisdfkgvqyekwitaglvmptfkivirlpana
ftgltwvmsfdaynritsritasadpvytlsvphwlihhklgtfsceidygelcghamwf
ksttfesprlhftcltgnnkelaadwqavvelyaeleeatsflgkptlvfdpgvfngkfq
fltcppiffdltavtalrsagltlgqvpmvgttkvynlnstlvscvlgmggtvrgrvhic
apifysivlwvvsewngttmdwnelfkypgvyveedgsfevkirspyhrtparllagqsq
rdmsslnfyaiagpiapsgetaqlpivvqideivrpdlslpsfeddyfvwvdfseftldk
eeieigsrffdftsntcrvsmgenpfaamiachglhsgvldlklqwslntefgkssgsvt
itklvgdkamgldgpshvfaiqklegttellvgnfaganpntrfslysrwmaikldqaks
ikvlrvlckprpgfsfygrtsfpv

  • Chain 'R':
    Sequence; same for both SEQRES and ATOM records:
    >2yi3R (R:)
glagrgviyipkdcqanrylgtlnirdmisdfkgvqyekwitaglvmptfkivirlpana
ftgltwvmsfdaynritsritasadpvytlsvphwlihhklgtfsceidygelcghamwf
ksttfesprlhftcltgnnkelaadwqavvelyaeleeatsflgkptlvfdpgvfngkfq
fltcppiffdltavtalrsagltlgqvpmvgttkvynlnstlvscvlgmggtvrgrvhic
apifysivlwvvsewngttmdwnelfkypgvyveedgsfevkirspyhrtparllagqsq
rdmsslnfyaiagpiapsgetaqlpivvqideivrpdlslpsfeddyfvwvdfseftldk
eeieigsrffdftsntcrvsmgenpfaamiachglhsgvldlklqwslntefgkssgsvt
itklvgdkamgldgpshvfaiqklegttellvgnfaganpntrfslysrwmaikldqaks
ikvlrvlckprpgfsfygrtsfpv

  • Chain 'S':
    Sequence; same for both SEQRES and ATOM records:
    >2yi3S (S:)
glagrgviyipkdcqanrylgtlnirdmisdfkgvqyekwitaglvmptfkivirlpana
ftgltwvmsfdaynritsritasadpvytlsvphwlihhklgtfsceidygelcghamwf
ksttfesprlhftcltgnnkelaadwqavvelyaeleeatsflgkptlvfdpgvfngkfq
fltcppiffdltavtalrsagltlgqvpmvgttkvynlnstlvscvlgmggtvrgrvhic
apifysivlwvvsewngttmdwnelfkypgvyveedgsfevkirspyhrtparllagqsq
rdmsslnfyaiagpiapsgetaqlpivvqideivrpdlslpsfeddyfvwvdfseftldk
eeieigsrffdftsntcrvsmgenpfaamiachglhsgvldlklqwslntefgkssgsvt
itklvgdkamgldgpshvfaiqklegttellvgnfaganpntrfslysrwmaikldqaks
ikvlrvlckprpgfsfygrtsfpv

  • Chain 'T':
    Sequence; same for both SEQRES and ATOM records:
    >2yi3T (T:)
glagrgviyipkdcqanrylgtlnirdmisdfkgvqyekwitaglvmptfkivirlpana
ftgltwvmsfdaynritsritasadpvytlsvphwlihhklgtfsceidygelcghamwf
ksttfesprlhftcltgnnkelaadwqavvelyaeleeatsflgkptlvfdpgvfngkfq
fltcppiffdltavtalrsagltlgqvpmvgttkvynlnstlvscvlgmggtvrgrvhic
apifysivlwvvsewngttmdwnelfkypgvyveedgsfevkirspyhrtparllagqsq
rdmsslnfyaiagpiapsgetaqlpivvqideivrpdlslpsfeddyfvwvdfseftldk
eeieigsrffdftsntcrvsmgenpfaamiachglhsgvldlklqwslntefgkssgsvt
itklvgdkamgldgpshvfaiqklegttellvgnfaganpntrfslysrwmaikldqaks
ikvlrvlckprpgfsfygrtsfpv