PDB entry 2yhq

View 2yhq on RCSB PDB site
Description: Structure of respiratory syncytial virus nucleocapsid protein, P1 crystal form
Deposited on 2011-05-04, released 2012-01-25
The last revision was dated 2014-12-10, with a file datestamp of 2014-12-05.
Experiment type: XRAY
Resolution: 3.6 Å
R-factor: 0.231
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: respiratory syncytial virus nucleocapsid protein
    Species: HUMAN RESPIRATORY SYNCYTIAL VIRUS [TaxId:11250]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: respiratory syncytial virus nucleocapsid protein
    Species: HUMAN RESPIRATORY SYNCYTIAL VIRUS [TaxId:11250]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: respiratory syncytial virus nucleocapsid protein
    Species: HUMAN RESPIRATORY SYNCYTIAL VIRUS [TaxId:11250]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: respiratory syncytial virus nucleocapsid protein
    Species: HUMAN RESPIRATORY SYNCYTIAL VIRUS [TaxId:11250]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: respiratory syncytial virus nucleocapsid protein
    Species: HUMAN RESPIRATORY SYNCYTIAL VIRUS [TaxId:11250]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: respiratory syncytial virus nucleocapsid protein
    Species: HUMAN RESPIRATORY SYNCYTIAL VIRUS [TaxId:11250]
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: respiratory syncytial virus nucleocapsid protein
    Species: HUMAN RESPIRATORY SYNCYTIAL VIRUS [TaxId:11250]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: respiratory syncytial virus nucleocapsid protein
    Species: HUMAN RESPIRATORY SYNCYTIAL VIRUS [TaxId:11250]
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: respiratory syncytial virus nucleocapsid protein
    Species: HUMAN RESPIRATORY SYNCYTIAL VIRUS [TaxId:11250]
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: respiratory syncytial virus nucleocapsid protein
    Species: HUMAN RESPIRATORY SYNCYTIAL VIRUS [TaxId:11250]
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: respiratory syncytial virus nucleocapsid protein
    Species: HUMAN RESPIRATORY SYNCYTIAL VIRUS [TaxId:11250]
    Database cross-references and differences (RAF-indexed):
  • Chain 'L':
    Compound: respiratory syncytial virus nucleocapsid protein
    Species: HUMAN RESPIRATORY SYNCYTIAL VIRUS [TaxId:11250]
    Database cross-references and differences (RAF-indexed):
  • Chain 'M':
    Compound: respiratory syncytial virus nucleocapsid protein
    Species: HUMAN RESPIRATORY SYNCYTIAL VIRUS [TaxId:11250]
    Database cross-references and differences (RAF-indexed):
  • Chain 'N':
    Compound: respiratory syncytial virus nucleocapsid protein
    Species: HUMAN RESPIRATORY SYNCYTIAL VIRUS [TaxId:11250]
    Database cross-references and differences (RAF-indexed):
  • Chain 'O':
    Compound: respiratory syncytial virus nucleocapsid protein
    Species: HUMAN RESPIRATORY SYNCYTIAL VIRUS [TaxId:11250]
    Database cross-references and differences (RAF-indexed):
  • Chain 'P':
    Compound: respiratory syncytial virus nucleocapsid protein
    Species: HUMAN RESPIRATORY SYNCYTIAL VIRUS [TaxId:11250]
    Database cross-references and differences (RAF-indexed):
  • Chain 'Q':
    Compound: respiratory syncytial virus nucleocapsid protein
    Species: HUMAN RESPIRATORY SYNCYTIAL VIRUS [TaxId:11250]
    Database cross-references and differences (RAF-indexed):
  • Chain 'R':
    Compound: RNA
    Species: Escherichia coli [TaxId:562]
  • Chain 'W':
    Compound: respiratory syncytial virus nucleocapsid protein
    Species: HUMAN RESPIRATORY SYNCYTIAL VIRUS [TaxId:11250]
    Database cross-references and differences (RAF-indexed):
  • Chain 'X':
    Compound: RNA
    Species: Escherichia coli [TaxId:562]
  • Chain 'Y':
    Compound: respiratory syncytial virus nucleocapsid protein
    Species: HUMAN RESPIRATORY SYNCYTIAL VIRUS [TaxId:11250]
    Database cross-references and differences (RAF-indexed):
  • Chain 'Z':
    Compound: respiratory syncytial virus nucleocapsid protein
    Species: HUMAN RESPIRATORY SYNCYTIAL VIRUS [TaxId:11250]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >2yhqA (A:)
malskvklndtlnkdqllssskytiqrstgdsidtpnydvqkhinklcgmllitedanhk
ftgligmlyamsrlgredtikilrdagyhvkangvdvtthrqdingkemkfevltlaslt
teiqinieiesrksykkmlkemgevapeyrhdspdcgmiilciaalvitklaagdrsglt
avirrannvlknemkrykgllpkdiansfyevfekhphfidvfvhfgiaqsstrggsrve
gifaglfmnaygagqvmlrwgvlaksvknimlghasvqaemeqvvevyeyaqklggeagf
yhilnnpkasllsltqfphfssvvlgnaaglgimgeyrgtprnqdlydaakayaeqlken
gvinysvldltaeel

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >2yhqB (B:)
malskvklndtlnkdqllssskytiqrstgdsidtpnydvqkhinklcgmllitedanhk
ftgligmlyamsrlgredtikilrdagyhvkangvdvtthrqdingkemkfevltlaslt
teiqinieiesrksykkmlkemgevapeyrhdspdcgmiilciaalvitklaagdrsglt
avirrannvlknemkrykgllpkdiansfyevfekhphfidvfvhfgiaqsstrggsrve
gifaglfmnaygagqvmlrwgvlaksvknimlghasvqaemeqvvevyeyaqklggeagf
yhilnnpkasllsltqfphfssvvlgnaaglgimgeyrgtprnqdlydaakayaeqlken
gvinysvldltaeel

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >2yhqC (C:)
malskvklndtlnkdqllssskytiqrstgdsidtpnydvqkhinklcgmllitedanhk
ftgligmlyamsrlgredtikilrdagyhvkangvdvtthrqdingkemkfevltlaslt
teiqinieiesrksykkmlkemgevapeyrhdspdcgmiilciaalvitklaagdrsglt
avirrannvlknemkrykgllpkdiansfyevfekhphfidvfvhfgiaqsstrggsrve
gifaglfmnaygagqvmlrwgvlaksvknimlghasvqaemeqvvevyeyaqklggeagf
yhilnnpkasllsltqfphfssvvlgnaaglgimgeyrgtprnqdlydaakayaeqlken
gvinysvldltaeel

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >2yhqD (D:)
malskvklndtlnkdqllssskytiqrstgdsidtpnydvqkhinklcgmllitedanhk
ftgligmlyamsrlgredtikilrdagyhvkangvdvtthrqdingkemkfevltlaslt
teiqinieiesrksykkmlkemgevapeyrhdspdcgmiilciaalvitklaagdrsglt
avirrannvlknemkrykgllpkdiansfyevfekhphfidvfvhfgiaqsstrggsrve
gifaglfmnaygagqvmlrwgvlaksvknimlghasvqaemeqvvevyeyaqklggeagf
yhilnnpkasllsltqfphfssvvlgnaaglgimgeyrgtprnqdlydaakayaeqlken
gvinysvldltaeel

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >2yhqE (E:)
malskvklndtlnkdqllssskytiqrstgdsidtpnydvqkhinklcgmllitedanhk
ftgligmlyamsrlgredtikilrdagyhvkangvdvtthrqdingkemkfevltlaslt
teiqinieiesrksykkmlkemgevapeyrhdspdcgmiilciaalvitklaagdrsglt
avirrannvlknemkrykgllpkdiansfyevfekhphfidvfvhfgiaqsstrggsrve
gifaglfmnaygagqvmlrwgvlaksvknimlghasvqaemeqvvevyeyaqklggeagf
yhilnnpkasllsltqfphfssvvlgnaaglgimgeyrgtprnqdlydaakayaeqlken
gvinysvldltaeel

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >2yhqF (F:)
malskvklndtlnkdqllssskytiqrstgdsidtpnydvqkhinklcgmllitedanhk
ftgligmlyamsrlgredtikilrdagyhvkangvdvtthrqdingkemkfevltlaslt
teiqinieiesrksykkmlkemgevapeyrhdspdcgmiilciaalvitklaagdrsglt
avirrannvlknemkrykgllpkdiansfyevfekhphfidvfvhfgiaqsstrggsrve
gifaglfmnaygagqvmlrwgvlaksvknimlghasvqaemeqvvevyeyaqklggeagf
yhilnnpkasllsltqfphfssvvlgnaaglgimgeyrgtprnqdlydaakayaeqlken
gvinysvldltaeel

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >2yhqG (G:)
malskvklndtlnkdqllssskytiqrstgdsidtpnydvqkhinklcgmllitedanhk
ftgligmlyamsrlgredtikilrdagyhvkangvdvtthrqdingkemkfevltlaslt
teiqinieiesrksykkmlkemgevapeyrhdspdcgmiilciaalvitklaagdrsglt
avirrannvlknemkrykgllpkdiansfyevfekhphfidvfvhfgiaqsstrggsrve
gifaglfmnaygagqvmlrwgvlaksvknimlghasvqaemeqvvevyeyaqklggeagf
yhilnnpkasllsltqfphfssvvlgnaaglgimgeyrgtprnqdlydaakayaeqlken
gvinysvldltaeel

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >2yhqH (H:)
malskvklndtlnkdqllssskytiqrstgdsidtpnydvqkhinklcgmllitedanhk
ftgligmlyamsrlgredtikilrdagyhvkangvdvtthrqdingkemkfevltlaslt
teiqinieiesrksykkmlkemgevapeyrhdspdcgmiilciaalvitklaagdrsglt
avirrannvlknemkrykgllpkdiansfyevfekhphfidvfvhfgiaqsstrggsrve
gifaglfmnaygagqvmlrwgvlaksvknimlghasvqaemeqvvevyeyaqklggeagf
yhilnnpkasllsltqfphfssvvlgnaaglgimgeyrgtprnqdlydaakayaeqlken
gvinysvldltaeel

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records:
    >2yhqI (I:)
malskvklndtlnkdqllssskytiqrstgdsidtpnydvqkhinklcgmllitedanhk
ftgligmlyamsrlgredtikilrdagyhvkangvdvtthrqdingkemkfevltlaslt
teiqinieiesrksykkmlkemgevapeyrhdspdcgmiilciaalvitklaagdrsglt
avirrannvlknemkrykgllpkdiansfyevfekhphfidvfvhfgiaqsstrggsrve
gifaglfmnaygagqvmlrwgvlaksvknimlghasvqaemeqvvevyeyaqklggeagf
yhilnnpkasllsltqfphfssvvlgnaaglgimgeyrgtprnqdlydaakayaeqlken
gvinysvldltaeel

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records:
    >2yhqJ (J:)
malskvklndtlnkdqllssskytiqrstgdsidtpnydvqkhinklcgmllitedanhk
ftgligmlyamsrlgredtikilrdagyhvkangvdvtthrqdingkemkfevltlaslt
teiqinieiesrksykkmlkemgevapeyrhdspdcgmiilciaalvitklaagdrsglt
avirrannvlknemkrykgllpkdiansfyevfekhphfidvfvhfgiaqsstrggsrve
gifaglfmnaygagqvmlrwgvlaksvknimlghasvqaemeqvvevyeyaqklggeagf
yhilnnpkasllsltqfphfssvvlgnaaglgimgeyrgtprnqdlydaakayaeqlken
gvinysvldltaeel

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records:
    >2yhqK (K:)
malskvklndtlnkdqllssskytiqrstgdsidtpnydvqkhinklcgmllitedanhk
ftgligmlyamsrlgredtikilrdagyhvkangvdvtthrqdingkemkfevltlaslt
teiqinieiesrksykkmlkemgevapeyrhdspdcgmiilciaalvitklaagdrsglt
avirrannvlknemkrykgllpkdiansfyevfekhphfidvfvhfgiaqsstrggsrve
gifaglfmnaygagqvmlrwgvlaksvknimlghasvqaemeqvvevyeyaqklggeagf
yhilnnpkasllsltqfphfssvvlgnaaglgimgeyrgtprnqdlydaakayaeqlken
gvinysvldltaeel

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >2yhqL (L:)
malskvklndtlnkdqllssskytiqrstgdsidtpnydvqkhinklcgmllitedanhk
ftgligmlyamsrlgredtikilrdagyhvkangvdvtthrqdingkemkfevltlaslt
teiqinieiesrksykkmlkemgevapeyrhdspdcgmiilciaalvitklaagdrsglt
avirrannvlknemkrykgllpkdiansfyevfekhphfidvfvhfgiaqsstrggsrve
gifaglfmnaygagqvmlrwgvlaksvknimlghasvqaemeqvvevyeyaqklggeagf
yhilnnpkasllsltqfphfssvvlgnaaglgimgeyrgtprnqdlydaakayaeqlken
gvinysvldltaeel

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records:
    >2yhqM (M:)
malskvklndtlnkdqllssskytiqrstgdsidtpnydvqkhinklcgmllitedanhk
ftgligmlyamsrlgredtikilrdagyhvkangvdvtthrqdingkemkfevltlaslt
teiqinieiesrksykkmlkemgevapeyrhdspdcgmiilciaalvitklaagdrsglt
avirrannvlknemkrykgllpkdiansfyevfekhphfidvfvhfgiaqsstrggsrve
gifaglfmnaygagqvmlrwgvlaksvknimlghasvqaemeqvvevyeyaqklggeagf
yhilnnpkasllsltqfphfssvvlgnaaglgimgeyrgtprnqdlydaakayaeqlken
gvinysvldltaeel

  • Chain 'N':
    Sequence; same for both SEQRES and ATOM records:
    >2yhqN (N:)
malskvklndtlnkdqllssskytiqrstgdsidtpnydvqkhinklcgmllitedanhk
ftgligmlyamsrlgredtikilrdagyhvkangvdvtthrqdingkemkfevltlaslt
teiqinieiesrksykkmlkemgevapeyrhdspdcgmiilciaalvitklaagdrsglt
avirrannvlknemkrykgllpkdiansfyevfekhphfidvfvhfgiaqsstrggsrve
gifaglfmnaygagqvmlrwgvlaksvknimlghasvqaemeqvvevyeyaqklggeagf
yhilnnpkasllsltqfphfssvvlgnaaglgimgeyrgtprnqdlydaakayaeqlken
gvinysvldltaeel

  • Chain 'O':
    Sequence; same for both SEQRES and ATOM records:
    >2yhqO (O:)
malskvklndtlnkdqllssskytiqrstgdsidtpnydvqkhinklcgmllitedanhk
ftgligmlyamsrlgredtikilrdagyhvkangvdvtthrqdingkemkfevltlaslt
teiqinieiesrksykkmlkemgevapeyrhdspdcgmiilciaalvitklaagdrsglt
avirrannvlknemkrykgllpkdiansfyevfekhphfidvfvhfgiaqsstrggsrve
gifaglfmnaygagqvmlrwgvlaksvknimlghasvqaemeqvvevyeyaqklggeagf
yhilnnpkasllsltqfphfssvvlgnaaglgimgeyrgtprnqdlydaakayaeqlken
gvinysvldltaeel

  • Chain 'P':
    Sequence; same for both SEQRES and ATOM records:
    >2yhqP (P:)
malskvklndtlnkdqllssskytiqrstgdsidtpnydvqkhinklcgmllitedanhk
ftgligmlyamsrlgredtikilrdagyhvkangvdvtthrqdingkemkfevltlaslt
teiqinieiesrksykkmlkemgevapeyrhdspdcgmiilciaalvitklaagdrsglt
avirrannvlknemkrykgllpkdiansfyevfekhphfidvfvhfgiaqsstrggsrve
gifaglfmnaygagqvmlrwgvlaksvknimlghasvqaemeqvvevyeyaqklggeagf
yhilnnpkasllsltqfphfssvvlgnaaglgimgeyrgtprnqdlydaakayaeqlken
gvinysvldltaeel

  • Chain 'Q':
    Sequence; same for both SEQRES and ATOM records:
    >2yhqQ (Q:)
malskvklndtlnkdqllssskytiqrstgdsidtpnydvqkhinklcgmllitedanhk
ftgligmlyamsrlgredtikilrdagyhvkangvdvtthrqdingkemkfevltlaslt
teiqinieiesrksykkmlkemgevapeyrhdspdcgmiilciaalvitklaagdrsglt
avirrannvlknemkrykgllpkdiansfyevfekhphfidvfvhfgiaqsstrggsrve
gifaglfmnaygagqvmlrwgvlaksvknimlghasvqaemeqvvevyeyaqklggeagf
yhilnnpkasllsltqfphfssvvlgnaaglgimgeyrgtprnqdlydaakayaeqlken
gvinysvldltaeel

  • Chain 'R':
    No sequence available.

  • Chain 'W':
    Sequence; same for both SEQRES and ATOM records:
    >2yhqW (W:)
malskvklndtlnkdqllssskytiqrstgdsidtpnydvqkhinklcgmllitedanhk
ftgligmlyamsrlgredtikilrdagyhvkangvdvtthrqdingkemkfevltlaslt
teiqinieiesrksykkmlkemgevapeyrhdspdcgmiilciaalvitklaagdrsglt
avirrannvlknemkrykgllpkdiansfyevfekhphfidvfvhfgiaqsstrggsrve
gifaglfmnaygagqvmlrwgvlaksvknimlghasvqaemeqvvevyeyaqklggeagf
yhilnnpkasllsltqfphfssvvlgnaaglgimgeyrgtprnqdlydaakayaeqlken
gvinysvldltaeel

  • Chain 'X':
    No sequence available.

  • Chain 'Y':
    Sequence; same for both SEQRES and ATOM records:
    >2yhqY (Y:)
malskvklndtlnkdqllssskytiqrstgdsidtpnydvqkhinklcgmllitedanhk
ftgligmlyamsrlgredtikilrdagyhvkangvdvtthrqdingkemkfevltlaslt
teiqinieiesrksykkmlkemgevapeyrhdspdcgmiilciaalvitklaagdrsglt
avirrannvlknemkrykgllpkdiansfyevfekhphfidvfvhfgiaqsstrggsrve
gifaglfmnaygagqvmlrwgvlaksvknimlghasvqaemeqvvevyeyaqklggeagf
yhilnnpkasllsltqfphfssvvlgnaaglgimgeyrgtprnqdlydaakayaeqlken
gvinysvldltaeel

  • Chain 'Z':
    Sequence; same for both SEQRES and ATOM records:
    >2yhqZ (Z:)
malskvklndtlnkdqllssskytiqrstgdsidtpnydvqkhinklcgmllitedanhk
ftgligmlyamsrlgredtikilrdagyhvkangvdvtthrqdingkemkfevltlaslt
teiqinieiesrksykkmlkemgevapeyrhdspdcgmiilciaalvitklaagdrsglt
avirrannvlknemkrykgllpkdiansfyevfekhphfidvfvhfgiaqsstrggsrve
gifaglfmnaygagqvmlrwgvlaksvknimlghasvqaemeqvvevyeyaqklggeagf
yhilnnpkasllsltqfphfssvvlgnaaglgimgeyrgtprnqdlydaakayaeqlken
gvinysvldltaeel