PDB entry 2ygu

View 2ygu on RCSB PDB site
Description: Crystal structure of fire ant venom allergen, Sol I 2
Deposited on 2011-04-20, released 2011-11-23
The last revision was dated 2012-02-01, with a file datestamp of 2012-01-27.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.23887
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: venom allergen 2
    Species: Solenopsis invicta [TaxId:13686]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: venom allergen 2
    Species: Solenopsis invicta [TaxId:13686]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: venom allergen 2
    Species: Solenopsis invicta [TaxId:13686]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: venom allergen 2
    Species: Solenopsis invicta [TaxId:13686]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: venom allergen 2
    Species: Solenopsis invicta [TaxId:13686]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: venom allergen 2
    Species: Solenopsis invicta [TaxId:13686]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P35775 (0-118)
      • expression tag (119)
  • Chain 'G':
    Compound: venom allergen 2
    Species: Solenopsis invicta [TaxId:13686]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: venom allergen 2
    Species: Solenopsis invicta [TaxId:13686]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HP6, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2yguA (A:)
dnkelkiirkdvaeclrtlpkcgnqpddplarvdvwhcamakrgvydnpdpavikersmk
mctkiitdpanvenckkvasrcvdretqgpksnrqkavniigcalragvaettvlarkkh
hhhhh

    Sequence, based on observed residues (ATOM records):
    >2yguA (A:)
dnkelkiirkdvaeclrtlpkcgnqpddplarvdvwhcamakrgvydnpdpavikersmk
mctkiitdpanvenckkvasrcvdretqgpksnrqkavniigcalragvaettvlar

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2yguB (B:)
dnkelkiirkdvaeclrtlpkcgnqpddplarvdvwhcamakrgvydnpdpavikersmk
mctkiitdpanvenckkvasrcvdretqgpksnrqkavniigcalragvaettvlarkkh
hhhhh

    Sequence, based on observed residues (ATOM records):
    >2yguB (B:)
dnkelkiirkdvaeclrtlpkcgnqpddplarvdvwhcamakrgvydnpdpavikersmk
mctkiitdpanvenckkvasrcvdretqgpksnrqkavniigcalragvaettvlarkk

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2yguC (C:)
dnkelkiirkdvaeclrtlpkcgnqpddplarvdvwhcamakrgvydnpdpavikersmk
mctkiitdpanvenckkvasrcvdretqgpksnrqkavniigcalragvaettvlarkkh
hhhhh

    Sequence, based on observed residues (ATOM records):
    >2yguC (C:)
dnkelkiirkdvaeclrtlpkcgnqpddplarvdvwhcamakrgvydnpdpavikersmk
mctkiitdpanvenckkvasrcvdretqgpksnrqkavniigcalragvaettvlark

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2yguD (D:)
dnkelkiirkdvaeclrtlpkcgnqpddplarvdvwhcamakrgvydnpdpavikersmk
mctkiitdpanvenckkvasrcvdretqgpksnrqkavniigcalragvaettvlarkkh
hhhhh

    Sequence, based on observed residues (ATOM records):
    >2yguD (D:)
dnkelkiirkdvaeclrtlpkcgnqpddplarvdvwhcamakrgvydnpdpavikersmk
mctkiitdpanvenckkvasrcvdretqgpksnrqkavniigcalragvaettvlar

  • Chain 'E':
    Sequence, based on SEQRES records:
    >2yguE (E:)
dnkelkiirkdvaeclrtlpkcgnqpddplarvdvwhcamakrgvydnpdpavikersmk
mctkiitdpanvenckkvasrcvdretqgpksnrqkavniigcalragvaettvlarkkh
hhhhh

    Sequence, based on observed residues (ATOM records):
    >2yguE (E:)
dnkelkiirkdvaeclrtlpkcgnqpddplarvdvwhcamakrgvydnpdpavikersmk
mctkiitdpanvenckkvasrcvdretqgpksnrqkavniigcalragvaettvlarkk

  • Chain 'F':
    Sequence, based on SEQRES records:
    >2yguF (F:)
dnkelkiirkdvaeclrtlpkcgnqpddplarvdvwhcamakrgvydnpdpavikersmk
mctkiitdpanvenckkvasrcvdretqgpksnrqkavniigcalragvaettvlarkkh
hhhhh

    Sequence, based on observed residues (ATOM records):
    >2yguF (F:)
dnkelkiirkdvaeclrtlpkcgnqpddplarvdvwhcamakrgvydnpdpavikersmk
mctkiitdpanvenckkvasrcvdretqgpksnrqkavniigcalragvaettvlarkkh

  • Chain 'G':
    Sequence, based on SEQRES records:
    >2yguG (G:)
dnkelkiirkdvaeclrtlpkcgnqpddplarvdvwhcamakrgvydnpdpavikersmk
mctkiitdpanvenckkvasrcvdretqgpksnrqkavniigcalragvaettvlarkkh
hhhhh

    Sequence, based on observed residues (ATOM records):
    >2yguG (G:)
dnkelkiirkdvaeclrtlpkcgnqpddplarvdvwhcamakrgvydnpdpavikersmk
mctkiitdpanvenckkvasrcvdretqgpksnrqkavniigcalragvaettvlark

  • Chain 'H':
    Sequence, based on SEQRES records:
    >2yguH (H:)
dnkelkiirkdvaeclrtlpkcgnqpddplarvdvwhcamakrgvydnpdpavikersmk
mctkiitdpanvenckkvasrcvdretqgpksnrqkavniigcalragvaettvlarkkh
hhhhh

    Sequence, based on observed residues (ATOM records):
    >2yguH (H:)
kelkiirkdvaeclrtlpkcgnqpddplarvdvwhcamakrgvydnpdpavikersmkmc
tkiitdpanvenckkvasrcvdretqgpksnrqkavniigcalragvaettvlarkk