PDB entry 2ygt

View 2ygt on RCSB PDB site
Description: Clostridium perfringens delta-toxin
Class: toxin
Keywords: toxin, beta-pore-forming toxin, haemolysin, enterotoxin
Deposited on 2011-04-20, released 2012-05-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-03-06, with a file datestamp of 2019-03-01.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: delta toxin
    Species: CLOSTRIDIUM PERFRINGENS [TaxId:1502]
    Database cross-references and differences (RAF-indexed):
    • Uniprot B8QGZ7 (Start-291)
      • expression tag (292)
    Domains in SCOPe 2.08: d2ygta1, d2ygta2
  • Heterogens: ZN, IMD, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2ygtA (A:)
gsndlgskseirkeengnvtiitqnnkqirkysstdsattksnskitvdasfvddkfsse
mttiislkgfipsgrkifalskyrgvmrwpikymvdlknnsldssvkivdsvpkntistk
evnntisysigggidtsnkaslnanyavsksisyvqpdyntiqtndtnsiaswntefaet
rdgynvnswnivygnqmfmrsrysgtsttnftpdyqlsslitggfspnfgvvltapngtk
ksqieislkreinsyhiawdtewqgrnypdskieetvkfeldwekhtirqishhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2ygtA (A:)
irkeengnvtiitqnnkqirkysstdsattksnskitvdasfvddkfssemttiislkgf
ipsgrkifalskyrgvmrwpikymvdlknnsldssvkivdsvpkntistkevnntisysi
gggidtsnkaslnanyavsksisyvqpdyntiqtndtnsiaswntefaetrdgynvnswn
ivygnqmfmrsrysgtsttnftpdyqlsslitggfspnfgvvltapngtkksqieislkr
einsyhiawdtewqgrnypdskieetvkfeldwekhtirqish