PDB entry 2ygd

View 2ygd on RCSB PDB site
Description: molecular architectures of the 24meric eye lens chaperone alphab- crystallin elucidated by a triple hybrid approach
Deposited on 2011-04-13, released 2011-12-07
The last revision was dated 2018-10-03, with a file datestamp of 2018-09-28.
Experiment type: EM
Resolution: 9.4 Å
R-factor: N/A
AEROSPACI score: -0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'L':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'M':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'N':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'O':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'P':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'Q':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'R':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'S':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'T':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'U':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'V':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'W':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'X':
    Compound: alpha-crystallin b chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdA (A:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdB (B:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdC (C:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdD (D:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdE (E:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdF (F:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdG (G:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdH (H:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdI (I:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdJ (J:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdK (K:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdL (L:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdM (M:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'N':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdN (N:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'O':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdO (O:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'P':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdP (P:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'Q':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdQ (Q:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'R':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdR (R:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'S':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdS (S:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'T':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdT (T:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'U':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdU (U:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'V':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdV (V:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'W':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdW (W:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk
    

  • Chain 'X':
    Sequence; same for both SEQRES and ATOM records:
    >2ygdX (X:)
    mdiaihhpwirrpffpfhspsrlfdqffgehllesdlfptstslspfylrppsflrapsw
    fdtglsemrlekdrfsvnldvkhfspeelkvkvlgdvievhgkheerqdehgfisrefhr
    kyripadvdpltitsslssdgvltvngprkqvsgpertipitreekpavtaapkk