PDB entry 2yg6

View 2yg6 on RCSB PDB site
Description: structure-based redesign of cofactor binding in putrescine oxidase: p15i-a394c double mutant
Deposited on 2011-04-11, released 2011-05-18
The last revision was dated 2019-02-20, with a file datestamp of 2019-02-15.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putrescine oxidase
    Species: Rhodococcus erythropolis [TaxId:1833]
    Database cross-references and differences (RAF-indexed):
    • Uniprot B0F9F6
      • engineered mutation (14)
      • engineered mutation (393)
  • Chain 'B':
    Compound: Putrescine oxidase
    Species: Rhodococcus erythropolis [TaxId:1833]
    Database cross-references and differences (RAF-indexed):
    • Uniprot B0F9F6
      • engineered mutation (14)
      • engineered mutation (393)
  • Heterogens: FAD, SO4, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2yg6A (A:)
vptlqrdvaivgagisglaaatalrkaglsvavieardrvggrtwtdtidgavleiggqw
vspdqtalislldelglktferyregesvyissagertrytgdsfptnettkkemdrlid
emddlaaqigaeepwahplardldtvsfkqwlinqsddaeardniglfiaggmltkpahs
fsalqavlmaasagsfshlvdedfildkrviggmqqvsirmaealgddvflnapvrtvkw
nesgatvladgdirveasrvilavppnlysrisydpplprrqhqmhqhqslglvikvhav
yetpfwredglsgtgfgasevvqevydntnheddrgtlvafvsdekadamfelsaeerka
tilaslarylgpkaeepvvyyesdwgseewtrgcyaasfdlgglhrygadsrtpvgpihf
scsdiaaegyqhvdgavrmgqrtaadiiarska

    Sequence, based on observed residues (ATOM records):
    >2yg6A (A:)
ptlqrdvaivgagisglaaatalrkaglsvavieardrvggrtwtdtidgavleiggqwv
spdqtalislldelglktferyregesvyissagertrytgdsfptnettkkemdrlide
mddlaaqigaeepwahplardldtvsfkqwlinqsddaeardniglfiaggmltkpahsf
salqavlmaasagsfshlvdedfildkrviggmqqvsirmaealgddvflnapvrtvkwn
esgatvladgdirveasrvilavppnlysrisydpplprrqhqmhqhqslglvikvhavy
etpfwredglsgtgfgasevvqevydntnheddrgtlvafvsdekadamfelsaeerkat
ilaslarylgpkaeepvvyyesdwgseewtrgcyaasfdlgglhrygadsrtpvgpihfs
csdiaaegyqhvdgavrmgqrtaadiiar

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2yg6B (B:)
vptlqrdvaivgagisglaaatalrkaglsvavieardrvggrtwtdtidgavleiggqw
vspdqtalislldelglktferyregesvyissagertrytgdsfptnettkkemdrlid
emddlaaqigaeepwahplardldtvsfkqwlinqsddaeardniglfiaggmltkpahs
fsalqavlmaasagsfshlvdedfildkrviggmqqvsirmaealgddvflnapvrtvkw
nesgatvladgdirveasrvilavppnlysrisydpplprrqhqmhqhqslglvikvhav
yetpfwredglsgtgfgasevvqevydntnheddrgtlvafvsdekadamfelsaeerka
tilaslarylgpkaeepvvyyesdwgseewtrgcyaasfdlgglhrygadsrtpvgpihf
scsdiaaegyqhvdgavrmgqrtaadiiarska

    Sequence, based on observed residues (ATOM records):
    >2yg6B (B:)
ptlqrdvaivgagisglaaatalrkaglsvavieardrvggrtwtdtidgavleiggqwv
spdqtalislldelglktferyregesvyissagertrytgdsfptnettkkemdrlide
mddlaaqigaeepwahplardldtvsfkqwlinqsddaeardniglfiaggmltkpahsf
salqavlmaasagsfshlvdedfildkrviggmqqvsirmaealgddvflnapvrtvkwn
esgatvladgdirveasrvilavppnlysrisydpplprrqhqmhqhqslglvikvhavy
etpfwredglsgtgfgasevvqevydntnheddrgtlvafvsdekadamfelsaeerkat
ilaslarylgpkaeepvvyyesdwgseewtrgcyaasfdlgglhrygadsrtpvgpihfs
csdiaaegyqhvdgavrmgqrtaadiiars