PDB entry 2yg2

View 2yg2 on RCSB PDB site
Description: structure of apolioprotein m in complex with sphingosine 1-phosphate
Deposited on 2011-04-11, released 2011-06-01
The last revision was dated 2011-06-22, with a file datestamp of 2011-06-17.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.19236
AEROSPACI score: 0.54 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: apolipoprotein m
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: apolipoprotein m
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: S1P, FLC, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2yg2A (A:)
    gshmnqcpehsqlttlgvdgkefpevhlgqwyfiagaaptkeelatfdpvdnivfnmaag
    sapmqlhlratirmkdglcvprkwiyhltegstdlrtegrpdmktelfssscpggimlne
    tgqgyqrfllynrsphppekcveefksltscldskaflltprnqeacelsnn
    

    Sequence, based on observed residues (ATOM records):
    >2yg2A (A:)
    cpsqlttlgvdgefpevhlgqwyfiagaaptkeelatfdpvdnivfnmaagsapmqlhlr
    atirmkdglcvprkwiyhltegstdlrtegrpdmktelfssscpggimlnetgqgyqrfl
    lynrsphppekcveefksltscldskaflltprnqeacelsnn
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2yg2B (B:)
    gshmnqcpehsqlttlgvdgkefpevhlgqwyfiagaaptkeelatfdpvdnivfnmaag
    sapmqlhlratirmkdglcvprkwiyhltegstdlrtegrpdmktelfssscpggimlne
    tgqgyqrfllynrsphppekcveefksltscldskaflltprnqeacelsnn
    

    Sequence, based on observed residues (ATOM records):
    >2yg2B (B:)
    lttlgvefpevhlgqwyfiagaaptkeelatfdpvdnivfnmaapmqlhlratirmkdgl
    cvprkwiyhltegstdlrtegrpdmktelfssscpggimlnetgqgyqrfllynrsphpp
    ekcveefksltscldskaflltprnqeacel