PDB entry 2yez

View 2yez on RCSB PDB site
Description: complex of a b21 chicken MHC class I molecule and a 10mer chicken peptide
Class: immune system
Keywords: immune system, bf21, immune response, immunoglobulin domain, MHC I
Deposited on 2011-03-31, released 2012-04-11
The last revision prior to the SCOPe 2.04 freeze date was dated 2012-04-11, with a file datestamp of 2012-04-06.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.2521
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Major histocompatibility complex class I glycoprotein haplotype B21
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q95601 (Start-290)
      • expression tag (291-298)
    Domains in SCOPe 2.04: d2yeza1, d2yeza2
  • Chain 'B':
    Compound: Beta-2-microglobulin
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d2yezb_
  • Chain 'C':
    Compound: 14-3-3 protein theta
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2yezA (A:)
    mgscgalglglllaavcgaaaelhtlryirtamtdpgpglpwfvdvgyvdgelfmhynst
    arravprtewiaantdqqywdretqivqgseqinrenldilrrrynqtggshtvqwmsgc
    diledgtirgyhqaaydgrdfvafdkgtmtltaavpeavptkrkweeggyaeglkqylee
    tcvewlrryveygkaelgrrerpevrvwgkeadgiltlscrahgfyprpivvswlkdgav
    rgqdaqsggivpngdgtyhtwvtidaqpgdgdkyqcrvehaslpqpglyswrsggglndi
    feaqkiewhensssvdklaaalehhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >2yezA (A:)
    elhtlryirtamtdpgpglpwfvdvgyvdgelfmhynstarravprtewiaantdqqywd
    retqivqgseqinrenldilrrrynqtggshtvqwmsgcdiledgtirgyhqaaydgrdf
    vafdkgtmtltaavpeavptkrkweeggyaeglkqyleetcvewlrryveygkaelgrre
    rpevrvwgkeadgiltlscrahgfyprpivvswlkdgavrgqdaqsggivpngdgtyhtw
    vtidaqpgdgdkyqcrvehaslpqpglyswrsggglnd
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2yezB (B:)
    dltpkvqvysrfpasagtknvlncfaagfhppkisitlmkdgvpmegaqysdmsfnddwt
    fqrlvhadftpssgstyackvehetlkepqvykwdpef
    

    Sequence, based on observed residues (ATOM records): (download)
    >2yezB (B:)
    ltpkvqvysrfpasagtknvlncfaagfhppkisitlmkdgvpmegaqysmsfnddwtfq
    rlvhadftpssgstyackvehetlkepqvykwdpef
    

  • Chain 'C':
    No sequence available.