PDB entry 2ydt

View 2ydt on RCSB PDB site
Description: structure of the alpha-l-arabinofuranosidase arb93a from fusarium graminearum in complexe with an iminosugar inhibitor
Deposited on 2011-03-24, released 2011-07-13
The last revision was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: exo-1,5-alpha-l-arabinofuranobiosidase
    Species: GIBBERELLA ZEAE [TaxId:5518]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: EDG, AHR, SO4, MN, ACT, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2ydtA (A:)
amkpaqkgktfsnveifdpptnyrdpqvlyarplelsdgtllgtwenyspeppnvwfpiv
kskdggktwkeiskvkdtqnnwglryqpqlyelprafgkypkgtvlcsgssipsdlsetl
ievyasrdkgytwefvshvalggealpnpgltpvwepflmtykeklilyysdqrdnaths
qklvhqtttdlkkwskvvddtkyanyyarpgmptvaklpnneyiyvyeygggpnppagsd
ywfpvyyrlskdpqkflnkahhqivsndgttpagspyvvwtpyggkngtivvscgtrsei
ftnqalgdasawkkwdvpqptaytrslltfqkdpdllmimgagilppaggkntvsasvvr
lsevmks

    Sequence, based on observed residues (ATOM records):
    >2ydtA (A:)
gktfsnveifdpptnyrdpqvlyarplelsdgtllgtwenyspeppnvwfpivkskdggk
twkeiskvkdtqnnwglryqpqlyelprafgkypkgtvlcsgssipsdlsetlievyasr
dkgytwefvshvalggealpnpgltpvwepflmtykeklilyysdqrdnathsqklvhqt
ttdlkkwskvvddtkyanyyarpgmptvaklpnneyiyvyeygggpnppagsdywfpvyy
rlskdpqkflnkahhqivsndgttpagspyvvwtpyggkngtivvscgtrseiftnqalg
dasawkkwdvpqptaytrslltfqkdpdllmimgagilppaggkntvsasvvrlsevmk