PDB entry 2ycb

View 2ycb on RCSB PDB site
Description: structure of the archaeal beta-casp protein with n-terminal kh domains from methanothermobacter thermautotrophicus
Deposited on 2011-03-13, released 2011-05-25
The last revision was dated 2011-05-25, with a file datestamp of 2011-05-20.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.21538
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: cleavage and polyadenylation specificity factor
    Species: METHANOTHERMOBACTER THERMAUTOTROPHICUS [TaxId:187420]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: cleavage and polyadenylation specificity factor
    Species: METHANOTHERMOBACTER THERMAUTOTROPHICUS [TaxId:187420]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ZN, PO4, K, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2ycbA (A:)
mvsemleeikrtimqrlpervqvakvefegpevviytknpeiitengnlirdiakdirkr
iiirsdrsvlmdpekairkiheivpeeakitnisfddvtceviiearkpglvigkygsts
reivkntgwapkilrtppisseiierirrtlrknskerkkilqqlgnrihqkpkydndwa
rltamggfrevgrsclylqtpnsrvlldcgvnvaggddknsypylnvpeftldsldavii
thahldhsgflpylyhygydgpvyctaptrdlmtllqldhidiahredeplpfnvkhvkk
svkhtitldygevtdiapdirltlhnaghilgsamahlhigdgqhnmvytgdfkyeqsrl
leaaanrfprietlvmestygghedvqpsrnraekelvktiystlrrggkilipvfavgr
aqelmivleeyirtgiidevpvyidgmiweanaihtarpeylskdlrdqifhmghnpfis
difhkvngmderreivegepsiilstsgmltggnsleyfkwlcedpdnslvfvgyqaegs
lgrriqkgwkeiplkdeddkmrvynvrmniktiegfsghsdrrqlmeyvkrispkpekil
lchgdnyktldlassiyrtyrietktplnletvriq

    Sequence, based on observed residues (ATOM records):
    >2ycbA (A:)
semleeikrtimqrlpervqvakvefegpevviytknpeiitengnlirdiakdirkrii
irsdrsvlmdpekairkiheivpeeakitnisfddvtceviiearkpglvigkygstsre
ivkntgwapkilrtppisseiierirrtlrknskerkkilqqlgnrihqkpkydndwarl
tamggfrevgrsclylqtpnsrvlldcgvnvaggddknsypylnvpeftldsldaviith
ahldhsgflpylyhygydgpvyctaptrdlmtllqldhidiahredeplpfnvkhvkksv
khtitldygevtdiapdirltlhnaghilgsamahlhigdgqhnmvytgdfkyeqsrlle
aaanrfprietlvmestygghedvqpsrnraekelvktiystlrrggkilipvfavgraq
elmivleeyirtgiidevpvyidgmiweanaihtarpeylskdlrdqifhmghnpfisdi
fhkvngmderreivegepsiilstsgmltggnsleyfkwlcedpdnslvfvgyqaegslg
rriqkgwkeiplkdeddkmrvynvrmniktiegfsghsdrrqlmeyvkrispkpekillc
hgdnyktldlassiyrtyrietktplnletvriq

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2ycbB (B:)
mvsemleeikrtimqrlpervqvakvefegpevviytknpeiitengnlirdiakdirkr
iiirsdrsvlmdpekairkiheivpeeakitnisfddvtceviiearkpglvigkygsts
reivkntgwapkilrtppisseiierirrtlrknskerkkilqqlgnrihqkpkydndwa
rltamggfrevgrsclylqtpnsrvlldcgvnvaggddknsypylnvpeftldsldavii
thahldhsgflpylyhygydgpvyctaptrdlmtllqldhidiahredeplpfnvkhvkk
svkhtitldygevtdiapdirltlhnaghilgsamahlhigdgqhnmvytgdfkyeqsrl
leaaanrfprietlvmestygghedvqpsrnraekelvktiystlrrggkilipvfavgr
aqelmivleeyirtgiidevpvyidgmiweanaihtarpeylskdlrdqifhmghnpfis
difhkvngmderreivegepsiilstsgmltggnsleyfkwlcedpdnslvfvgyqaegs
lgrriqkgwkeiplkdeddkmrvynvrmniktiegfsghsdrrqlmeyvkrispkpekil
lchgdnyktldlassiyrtyrietktplnletvriq

    Sequence, based on observed residues (ATOM records):
    >2ycbB (B:)
vsemleeikrtimqrlpervqvakvefegpevviytknpeiitengnlirdiakdirkri
iirsdrsvlmdpekairkiheivpeeakitnisfddvtceviiearkpglvigkygstsr
eivkntgwapkilrtppisseiierirrtlrknskerkkilqqlgnrihqkpkydndwar
ltamggfrevgrsclylqtpnsrvlldcgvnvaggddknsypylnvpeftldsldaviit
hahldhsgflpylyhygydgpvyctaptrdlmtllqldhidiahredeplpfnvkhvkks
vkhtitldygevtdiapdirltlhnaghilgsamahlhigdgqhnmvytgdfkyeqsrll
eaaanrfprietlvmestygghedvqpsrnraekelvktiystlrrggkilipvfavgra
qelmivleeyirtgiidevpvyidgmiweanaihtarpeylskdlrdqifhmghnpfisd
ifhkvngmderreivegepsiilstsgmltggnsleyfkwlcedpdnslvfvgyqaegsl
grriqkgwkeiplkdeddkmrvynvrmniktiegfsghsdrrqlmeyvkrispkpekill
chgdnyktldlassiyrtyrietktplnletvriq