PDB entry 2ybx

View 2ybx on RCSB PDB site
Description: Crystal Structure of Human Phosphatidylinositol-5-phosphate 4-kinase type-2 alpha
Class: transferase
Keywords: transferase, kinase, signalling
Deposited on 2011-03-30, released 2012-01-25
The last revision prior to the SCOPe 2.08 freeze date was dated 2012-01-25, with a file datestamp of 2012-01-20.
Experiment type: XRAY
Resolution: 2.56 Å
R-factor: 0.1907
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: phosphatidylinositol-5-phosphate 4-kinase type-2 alpha
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P48426 (23-393)
      • expression tag (16-22)
    Domains in SCOPe 2.08: d2ybxa1, d2ybxa2
  • Chain 'B':
    Compound: phosphatidylinositol-5-phosphate 4-kinase type-2 alpha
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P48426 (23-393)
      • expression tag (17-22)
    Domains in SCOPe 2.08: d2ybxb1, d2ybxb2
  • Heterogens: PO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2ybxA (A:)
mhhhhhhssgvdlgtenlyfqsmdpllsvlmwgvnhsinelshvqipvmlmpddfkaysk
ikvdnhlfnkenmpshfkfkeycpmvfrnlrerfgiddqdfqnsltrsaplpndsqarsg
arfhtsydkryiiktitsedvaemhnilkkyhqyivechgitllpqflgmyrlnvdgvei
yvivtrnvfshrlsvyrkydlkgstvareasdkekakelptlkdndfinegqkiyiddnn
kkvfleklkkdveflaqlklmdysllvgihdveraeqeeveceendgeeegesdgthpvg
tppdspgntlnsspplapgefdpnidvygikchensprkevyfmaiidilthydakkkaa
haaktvkhgagaeistvnpeqyskrfldfighil

    Sequence, based on observed residues (ATOM records): (download) 
    >2ybxA (A:)
nlyfqsmdpllsvlmwgvnhsinelshvqipvmlmpddfkayskikvdnhlfnkenmpsh
fkfkeycpmvfrnlrerfgiddqdfqnsltrsaplpndgarfhtsydkryiiktitsedv
aemhnilkkyhqyivechgitllpqflgmyrlnvdgveiyvivtrnvfshrlsvyrkydl
kgstvareasdkekakelptlkdndfinegqkiyiddnnkkvfleklkkdveflaqlklm
dysllvgihdveraeqeevecplapgefdpnidvygikchensprkevyfmaiidilthy
dastvnpeqyskrfldfighil

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2ybxB (B:)
mhhhhhhssgvdlgtenlyfqsmdpllsvlmwgvnhsinelshvqipvmlmpddfkaysk
ikvdnhlfnkenmpshfkfkeycpmvfrnlrerfgiddqdfqnsltrsaplpndsqarsg
arfhtsydkryiiktitsedvaemhnilkkyhqyivechgitllpqflgmyrlnvdgvei
yvivtrnvfshrlsvyrkydlkgstvareasdkekakelptlkdndfinegqkiyiddnn
kkvfleklkkdveflaqlklmdysllvgihdveraeqeeveceendgeeegesdgthpvg
tppdspgntlnsspplapgefdpnidvygikchensprkevyfmaiidilthydakkkaa
haaktvkhgagaeistvnpeqyskrfldfighil

    Sequence, based on observed residues (ATOM records): (download) 
    >2ybxB (B:)
lyfqsmdpllsvlmwgvnhsinelshvqipvmlmpddfkayskikvdnhlfnkenmpshf
kfkeycpmvfrnlrerfgiddqdfqnsltrsaplpndssgarfhtsydkryiiktitsed
vaemhnilkkyhqyivechgitllpqflgmyrlnvdgveiyvivtrnvfshrlsvyrkyd
lkgstvareasdkekakelptlkdndfinegqkiyiddnnkkvfleklkkdveflaqlkl
mdysllvgihdveraapgefdpnidvygikchensprkevyfmaiidilthydavnpeqy
skrfldfighil