PDB entry 2yaz

View 2yaz on RCSB PDB site
Description: the crystal structure of leishmania major dutpase in complex dump
Class: hydrolase
Keywords: hydrolase, leishmaniasis
Deposited on 2011-02-25, released 2011-03-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-05-11, with a file datestamp of 2011-05-06.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.20383
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: dutpase
    Species: LEISHMANIA MAJOR [TaxId:5664]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yaza_
  • Chain 'B':
    Compound: dutpase
    Species: LEISHMANIA MAJOR [TaxId:5664]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yazb_
  • Chain 'D':
    Compound: dutpase
    Species: LEISHMANIA MAJOR [TaxId:5664]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yazd_
  • Chain 'E':
    Compound: dutpase
    Species: LEISHMANIA MAJOR [TaxId:5664]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yaze_
  • Heterogens: UMP, SO4, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2yazA (A:)
gpamkrarsanipgailhslaelqdglnamidpswravrsldnwalaitmestelldsyp
wkwwknlnatpdlanvrielvdifhfslsgamqmrstpddeipaaslkplkevmttflpa
kectsdpygfvffpltdtqnaiasfrniiqlanayrfdviieciiyaaedlgfnlvayyi
akhtlncirqlsgykdgsyvkvnngvednsllhncikdvsldevldadkyvqawnsiman
vyeafqikesdrkdaerwfalakenrlaika

    Sequence, based on observed residues (ATOM records): (download) 
    >2yazA (A:)
nipgailhslaelqdglnamidpswravrsldnwalaitmestelldsypwkwwknlnat
pdlanvrielvdifhfslsgamqmrstpddeipaaslkplkevmttflpakectsdpygf
vffpltdtqnaiasfrniiqlanayrfdviieciiyaaedlgfnlvayyiakhtlncirq
lsgykdgsyvkvnngvednsllhncikdvsldevldadkyvqawnsimanvyeafqikes
drkdaerwfalakenrl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2yazB (B:)
gpamkrarsanipgailhslaelqdglnamidpswravrsldnwalaitmestelldsyp
wkwwknlnatpdlanvrielvdifhfslsgamqmrstpddeipaaslkplkevmttflpa
kectsdpygfvffpltdtqnaiasfrniiqlanayrfdviieciiyaaedlgfnlvayyi
akhtlncirqlsgykdgsyvkvnngvednsllhncikdvsldevldadkyvqawnsiman
vyeafqikesdrkdaerwfalakenrlaika

    Sequence, based on observed residues (ATOM records): (download) 
    >2yazB (B:)
krarsanipgailhslaelqdglnamidpswravrsldnwalaitmestelldsypwkww
knlnatpdlanvrielvdifhfslsgamqmrstpddeipaaslkplkevmttflpakect
sdpygfvffpltdtqnaiasfrniiqlanayrfdviieciiyaaedlgfnlvayyiakht
lncirqlsgykdgsyvkvnngvednsllhncikdvsldevldadkyvqawnsimanvyea
fqikesdrkdaerwfalakenrl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2yazD (D:)
gpamkrarsanipgailhslaelqdglnamidpswravrsldnwalaitmestelldsyp
wkwwknlnatpdlanvrielvdifhfslsgamqmrstpddeipaaslkplkevmttflpa
kectsdpygfvffpltdtqnaiasfrniiqlanayrfdviieciiyaaedlgfnlvayyi
akhtlncirqlsgykdgsyvkvnngvednsllhncikdvsldevldadkyvqawnsiman
vyeafqikesdrkdaerwfalakenrlaika

    Sequence, based on observed residues (ATOM records): (download) 
    >2yazD (D:)
nipgailhslaelqdglnamidpswravrsldnwalaitmestelldsypwkwwknlnat
pdlanvrielvdifhfslsgamqmrstpddeipaaslkplkevmttflpakectsdpygf
vffpltdtqnaiasfrniiqlanayrfdviieciiyaaedlgfnlvayyiakhtlncirq
lsgykdgsyvkvnngvednsllhncikdvsldevldadkyvqawnsimanvyeafqikes
drkdaerwfalakenrl

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2yazE (E:)
gpamkrarsanipgailhslaelqdglnamidpswravrsldnwalaitmestelldsyp
wkwwknlnatpdlanvrielvdifhfslsgamqmrstpddeipaaslkplkevmttflpa
kectsdpygfvffpltdtqnaiasfrniiqlanayrfdviieciiyaaedlgfnlvayyi
akhtlncirqlsgykdgsyvkvnngvednsllhncikdvsldevldadkyvqawnsiman
vyeafqikesdrkdaerwfalakenrlaika

    Sequence, based on observed residues (ATOM records): (download) 
    >2yazE (E:)
nipgailhslaelqdglnamidpswravrsldnwalaitmestelldsypwkwwknlnat
pdlanvrielvdifhfslsgamqmrstpddeipaaslkplkevmttflpakectsdpygf
vffpltdtqnaiasfrniiqlanayrfdviieciiyaaedlgfnlvayyiakhtlncirq
lsgykdgsyvkvnngvednsllhncikdvsldevldadkyvqawnsimanvyeafqikes
drkdaerwfalakenrl