PDB entry 2ya8

View 2ya8 on RCSB PDB site
Description: crystal structure of streptococcus pneumoniae nana (tigr4) in complex with oseltamivir carboxylate
Deposited on 2011-02-18, released 2011-04-27
The last revision was dated 2020-09-02, with a file datestamp of 2020-08-28.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: N/A
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: neuraminidase a
    Species: STREPTOCOCCUS PNEUMONIAE [TaxId:170187]
    Database cross-references and differences (RAF-indexed):
    • Uniprot B2DJD9
      • see remark 999 (155)
      • see remark 999 (299)
  • Chain 'B':
    Compound: neuraminidase a
    Species: STREPTOCOCCUS PNEUMONIAE [TaxId:170187]
    Database cross-references and differences (RAF-indexed):
    • Uniprot B2DJD9
      • see remark 999 (155)
      • see remark 999 (299)
  • Heterogens: G39, CL, FMT, EDO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2ya8A (A:)
    ahhhhhhssglevlfqgppegaaltektdifesgrngnpnkdgiksyripallktdkgtl
    iagaderrlhssdwgdigmvirrsedngktwgdrvtitnlrdnpkasdpsigspvnidmv
    lvqdpetkrifsiydmfpegkgifgmssqkeeaykkidgktyqilyregekgaytireng
    tvytpdgkatdyrvvvdpvkpaysdkgdlykgdqllgniyfttnktspfriakdsylwms
    ysdddgktwsapqditpmvkadwmkflgvgpgtgivlrngphkgrilipvyttnnvshld
    gsqssrviysddhgktwhageavndnrqvdgqkihsstmnnrraqntestvvqlnngdvk
    lfmrgltgdlqvatskdggvtwekdikrypqvkdvyvqmsaihtmhegkeyiilsnaggp
    krengmvhlarveengeltwlkhnpiqkgefaynslqelgngeygilyehtekgqnaytl
    sfrkfnweflskn
    

    Sequence, based on observed residues (ATOM records):
    >2ya8A (A:)
    altektdifesgrngnpnkdgiksyripallktdkgtliagaderrlhssdwgdigmvir
    rsedngktwgdrvtitnlrdnpkasdpsigspvnidmvlvqdpetkrifsiydmfpegkg
    ifgmssqkeeaykkidgktyqilyregekgaytirengtvytpdgkatdyrvvvdpvkpa
    ysdkgdlykgdqllgniyfttnktspfriakdsylwmsysdddgktwsapqditpmvkad
    wmkflgvgpgtgivlrngphkgrilipvyttnnvshldgsqssrviysddhgktwhagea
    vndnrqvdgqkihsstmnnrraqntestvvqlnngdvklfmrgltgdlqvatskdggvtw
    ekdikrypqvkdvyvqmsaihtmhegkeyiilsnaggpkrengmvhlarveengeltwlk
    hnpiqkgefaynslqelgngeygilyehtekgqnaytlsfrkfnweflsk
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2ya8B (B:)
    ahhhhhhssglevlfqgppegaaltektdifesgrngnpnkdgiksyripallktdkgtl
    iagaderrlhssdwgdigmvirrsedngktwgdrvtitnlrdnpkasdpsigspvnidmv
    lvqdpetkrifsiydmfpegkgifgmssqkeeaykkidgktyqilyregekgaytireng
    tvytpdgkatdyrvvvdpvkpaysdkgdlykgdqllgniyfttnktspfriakdsylwms
    ysdddgktwsapqditpmvkadwmkflgvgpgtgivlrngphkgrilipvyttnnvshld
    gsqssrviysddhgktwhageavndnrqvdgqkihsstmnnrraqntestvvqlnngdvk
    lfmrgltgdlqvatskdggvtwekdikrypqvkdvyvqmsaihtmhegkeyiilsnaggp
    krengmvhlarveengeltwlkhnpiqkgefaynslqelgngeygilyehtekgqnaytl
    sfrkfnweflskn
    

    Sequence, based on observed residues (ATOM records):
    >2ya8B (B:)
    altektdifesgrngnpnkdgiksyripallktdkgtliagaderrlhssdwgdigmvir
    rsedngktwgdrvtitnlrdnpkasdpsigspvnidmvlvqdpetkrifsiydmfpegkg
    ifgmssqkeeaykkidgktyqilyregekgaytirengtvytpdgkatdyrvvvdpvkpa
    ysdkgdlykgdqllgniyfttnktspfriakdsylwmsysdddgktwsapqditpmvkad
    wmkflgvgpgtgivlrngphkgrilipvyttnnvshldgsqssrviysddhgktwhagea
    vndnrqvdgqkihsstmnnrraqntestvvqlnngdvklfmrgltgdlqvatskdggvtw
    ekdikrypqvkdvyvqmsaihtmhegkeyiilsnaggpkrengmvhlarveengeltwlk
    hnpiqkgefaynslqelgngeygilyehtekgqnaytlsfrkfnweflsk