PDB entry 2y94

View 2y94 on RCSB PDB site
Description: Structure of an active form of mammalian AMPK
Deposited on 2011-02-11, released 2011-03-16
The last revision was dated 2013-12-25, with a file datestamp of 2013-12-20.
Experiment type: XRAY
Resolution: 3.24 Å
R-factor: 0.2491
AEROSPACI score: 0.1 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 5'-amp-activated protein kinase catalytic subunit alpha-1
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: 5'-amp-activated protein kinase subunit beta-2
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: 5'-amp-activated protein kinase catalytic subunit alpha-1
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: 5'-amp-activated protein kinase subunit gamma-1
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: STU, AMP

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2y94A (A:)
    gpmaekqkhdgrvkighyilgdtlgvgtfgkvkvgkheltghkvavkilnrqkirsldvv
    gkirreiqnlklfrhphiiklyqvistpsdifmvmeyvsggelfdyickngrldekesrr
    lfqqilsgvdychrhmvvhrdlkpenvlldahmnakiadfglsnmmsdgeflrtscgspn
    yaapevisgrlyagpevdiwssgvilyallcgtlpfdddhvptlfkkicdgifytpqyln
    psvisllkhmlqvdpmkratikdirehewfkqdlpkylfpedpsysstmiddealkevce
    kfecseeevlsclynrnhqdplavayhliidnrrimneakdfylatsppdsflddhhltr
    phpervpflvaetprarhtldelnpqkskhqgvrkakwhlgirsqsrpndimaevcraik
    qldyewkvvnpyylrvrrknpvtstfskmslqlyqvdsrtylldfrsiddeilevl
    

    Sequence, based on observed residues (ATOM records):
    >2y94A (A:)
    hdgrvkighyilgdtlgvgtfgkvkvgkheltghkvavkilnrqkirsldvvgkirreiq
    nlklfrhphiiklyqvistpsdifmvmeyvsggelfdyickngrldekesrrlfqqilsg
    vdychrhmvvhrdlkpenvlldahmnakiadfglsnmmsdgeflrtscgspnyaapevis
    grlyagpevdiwssgvilyallcgtlpfdddhvptlfkkicdgifytpqylnpsvisllk
    hmlqvdpmkratikdirehewfkqdlpkylfpedpsysstmiddealkevcekrrimnea
    kdfylatsppdsflddhhltrphpervpflvaetprarhtldelnpqkskhqgvrkakwh
    lgirsqsrpndimaevcraikqldyewkvvnpyylrvrrknpvtstfskmslqlyqvdsr
    tylldfrsidde
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2y94B (B:)
    mgpygqemyafrseerfksppilpphllqvilnkdtniscdpallpepnhvmlnhlyals
    ikdsvmvlsathrykkkyvttllykpi
    

    Sequence, based on observed residues (ATOM records):
    >2y94B (B:)
    seerfksppilpphllqvilnkdtniscdpallpepnhvmlnhlyalsikdsvmvlsath
    rykkkyvttllykpi
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2y94C (C:)
    fqvaprpgshtieffemcanlikilaq
    

    Sequence, based on observed residues (ATOM records):
    >2y94C (C:)
    vaprpgshtieffemcanlikilaq
    

  • Chain 'E':
    Sequence, based on SEQRES records:
    >2y94E (E:)
    mesvaaesapapenehsqetpesnssvyttfmkshrcydliptssklvvfdtslqvkkaf
    falvtngvraaplwdskkqsfvgmltitdfinilhryyksalvqiyeleehkietwrevy
    lqdsfkplvcispnaslfdavsslirnkihrlpvidpesgntlyilthkrilkflklfit
    efpkpefmsksleelqigtyaniamvrtttpvyvalgifvqhrvsalpvvdekgrvvdiy
    skfdvinlaaektynnldvsvtkalqhrshyfegvlkcylhetleaiinrlveaevhrlv
    vvdehdvvkgivslsdilqalvltggekkp
    

    Sequence, based on observed residues (ATOM records):
    >2y94E (E:)
    snssvyttfmkshrcydliptssklvvfdtslqvkkaffalvtngvraaplwdskkqsfv
    gmltitdfinilhryyksalvqiyeleehkietwrevylqdsfkplvcispnaslfdavs
    slirnkihrlpvidpesgntlyilthkrilkflklfitefpkpefmsksleelqigtyan
    iamvrtttpvyvalgifvqhrvsalpvvdekgrvvdiyskfdvinlaaektynnldvsvt
    kalqhrshyfegvlkcylhetleaiinrlveaevhrlvvvdehdvvkgivslsdilqalv
    ltgg