PDB entry 2y8s

View 2y8s on RCSB PDB site
Description: co-structure of an ama1 mutant (y230a) with a surface exposed region of ron2 from toxoplasma gondii
Deposited on 2011-02-10, released 2011-08-03
The last revision was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 2.55 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: apical membrane antigen, putative
    Species: Toxoplasma gondii [TaxId:5811]
    Database cross-references and differences (RAF-indexed):
    • Uniprot B9QC59
      • engineered mutation (171)
  • Chain 'B':
    Compound: rhoptry neck protein 2
    Species: TOXOPLASMA GONDII, synthetic [TaxId:5811]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: apical membrane antigen, putative
    Species: Toxoplasma gondii [TaxId:5811]
    Database cross-references and differences (RAF-indexed):
    • Uniprot B9QC59
      • engineered mutation (171)
  • Chain 'E':
    Compound: rhoptry neck protein 2
    Species: TOXOPLASMA GONDII, synthetic [TaxId:5811]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NAG, BO3, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2y8sA (A:)
gsamgsastsgnpfqanvemktfmerfnlthhhqsgiyvdlgqdkevdgtlyrepaglcp
iwgkhielqqpdrppyrnnfledvptekeykqsgnplpggfnlnfvtpsgqrispfpmel
leknsnikastdlgrcaefafktvamdknnkatkyrypfvydskkrlchilavsmqlmeg
kkycsvkgeppdltwycfkprksvtenhhliygsayvgenpdafiskcpnqalrgyrfgv
wkkgrcldyteltdtvierveskaqcwvktfendgvasdqphtypltsqaswndwwplhq
sdqphsggvgrnygfyyvdttgegkcalsdqvpdclvsdsaavsytaagslseetpnfii
psnpsvtpptpetalqctadkfpdsfgacdvqackrqktscvggqiqstsvdctadeqne
cgsntaaalvpr

    Sequence, based on observed residues (ATOM records):
    >2y8sA (A:)
gnpfqanvemktfmerfnlthhhqsgiyvdlgqdkevdgtlyrepaglcpiwgkhielqq
pdrppyrnnfledvptekeykqsgnplpggfnlnfvtpsgqrispfpmelleknsnikas
tdlgrcaefafktvamdknnkatkyrypfvydskkrlchilavsmqlmegkkycsvkgep
pdltwycfkprksvtenhhliygsayvgenpdafiskcpnqalrgyrfgvwkkgrcldyt
eltdtvierveskaqcwvktfendgvasdqpdqphsggvgrnygfyyvdttgegkcalsd
qvpdclvsdsaavsytaagslseetpnfiipsnptpetalqctadkfpdsfgacdvqack
rqktscvggqiqstsvdctadeqnec

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2y8sB (B:)
divqhmediggappvscvtneilgvtcapqaiakatt

    Sequence, based on observed residues (ATOM records):
    >2y8sB (B:)
divqhmediggappvscvtneilgvtcapqaiakat

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2y8sD (D:)
gsamgsastsgnpfqanvemktfmerfnlthhhqsgiyvdlgqdkevdgtlyrepaglcp
iwgkhielqqpdrppyrnnfledvptekeykqsgnplpggfnlnfvtpsgqrispfpmel
leknsnikastdlgrcaefafktvamdknnkatkyrypfvydskkrlchilavsmqlmeg
kkycsvkgeppdltwycfkprksvtenhhliygsayvgenpdafiskcpnqalrgyrfgv
wkkgrcldyteltdtvierveskaqcwvktfendgvasdqphtypltsqaswndwwplhq
sdqphsggvgrnygfyyvdttgegkcalsdqvpdclvsdsaavsytaagslseetpnfii
psnpsvtpptpetalqctadkfpdsfgacdvqackrqktscvggqiqstsvdctadeqne
cgsntaaalvpr

    Sequence, based on observed residues (ATOM records):
    >2y8sD (D:)
gnpfqamktfmerfnlthhhqsgiyvdlgqdkevdgtlyrepaglcpiwgkhielqqpdr
ppyrnnfledvptekeykqsgnplpggfnlnfvtpsgqrispfpmelleknsnikastdl
grcaefafktvamdknnkatkyrypfvydskkrlchilavsmqlmegkkycsvkgeppdl
twycfkprksvtenhhliygsayvgenpdafiskcpnqalrgyrfgvwkkgrcldytelt
dtvierveskaqcwvktfendgvasdqphtypltsndwwplhqsdqphsggvgrnygfyy
vdttgegkcalsdqvpdclvsdsaavsytaagslseetpnfiipsnpetalqctadkfpd
sfgacdvqackrqktscvggqiqstsvdcta

  • Chain 'E':
    Sequence, based on SEQRES records:
    >2y8sE (E:)
divqhmediggappvscvtneilgvtcapqaiakatt

    Sequence, based on observed residues (ATOM records):
    >2y8sE (E:)
divqhmediggappvscvtneilgvtcapqaiaka