PDB entry 2y8f

View 2y8f on RCSB PDB site
Description: structure of the ran-binding domain from human ranbp3 (wild type)
Class: protein transport
Keywords: protein transport, crm1-mediated nuclear export
Deposited on 2011-02-06, released 2011-02-16
The last revision prior to the SCOPe 2.05 freeze date was dated 2011-03-16, with a file datestamp of 2011-03-11.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.193
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ran-binding protein 3
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d2y8fa_
  • Chain 'B':
    Compound: ran-binding protein 3
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d2y8fb_
  • Chain 'C':
    Compound: ran-binding protein 3
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d2y8fc_
  • Chain 'D':
    Compound: ran-binding protein 3
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9H6Z4 (3-137)
      • expression tag (0-2)
    Domains in SCOPe 2.05: d2y8fd_
  • Heterogens: CL, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2y8fA (A:)
gamkvevitgeeaesnvlqmqcklfvfdktsqswvergrgllrlndmastddgtlqsrlv
mrtqgslrlilntklwaqmqidkaseksiritamdtedqgvkvflisasskdtgqlyaal
hhrilalrsrveqeqeak

    Sequence, based on observed residues (ATOM records): (download) 
    >2y8fA (A:)
evitgeeaesnvlqmqcklfvfdktsqswvergrgllrlndmastddgtlqsrlvmrtqg
slrlilntklwaqmqidkaseksiritamdtedqgvkvflisasskdtgqlyaalhhril
alrsrve

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2y8fB (B:)
gamkvevitgeeaesnvlqmqcklfvfdktsqswvergrgllrlndmastddgtlqsrlv
mrtqgslrlilntklwaqmqidkaseksiritamdtedqgvkvflisasskdtgqlyaal
hhrilalrsrveqeqeak

    Sequence, based on observed residues (ATOM records): (download) 
    >2y8fB (B:)
esnvlqmqcklfvfdktsqswvergrgllrlndmlqsrlvmrtqgslrlilntklwaqmq
idkaseksiritamdtqgvkvflisasskdtgqlyaalhhrilalrsrveqe

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2y8fC (C:)
gamkvevitgeeaesnvlqmqcklfvfdktsqswvergrgllrlndmastddgtlqsrlv
mrtqgslrlilntklwaqmqidkaseksiritamdtedqgvkvflisasskdtgqlyaal
hhrilalrsrveqeqeak

    Sequence, based on observed residues (ATOM records): (download) 
    >2y8fC (C:)
esnvlqmqcklfvfdktsqswvergrgllrlndmagtlqsrlvmrtqgslrlilntklwa
qmqidkaseksiritamdtedqgvkvflisasskdtgqlyaalhhrilalrsrv

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2y8fD (D:)
gamkvevitgeeaesnvlqmqcklfvfdktsqswvergrgllrlndmastddgtlqsrlv
mrtqgslrlilntklwaqmqidkaseksiritamdtedqgvkvflisasskdtgqlyaal
hhrilalrsrveqeqeak

    Sequence, based on observed residues (ATOM records): (download) 
    >2y8fD (D:)
gamkvevitgeeaesnvlqmqcklfvfdktsqswvergrgllrlndmatlqsrlvmrtqg
slrlilntklwaqmqidkaseksiritamdtedqgvkvflisasskdtgqlyaalhhril
alrsrveqeqeak