PDB entry 2y8e
View 2y8e on RCSB PDB site
Description: crystal structure of d. melanogaster rab6 gtpase bound to gmppnp
Class: hydrolase
Keywords: hydrolase, nucleotide binding, GTP binding
Deposited on
2011-02-04, released
2011-07-06
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-08-10, with a file datestamp of
2011-08-05.
Experiment type: XRAY
Resolution: 1.39 Å
R-factor: 0.14607
AEROSPACI score: 0.72
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: rab-protein 6
Species: Drosophila melanogaster [TaxId:7227]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2y8ea_ - Chain 'B':
Compound: rab-protein 6
Species: Drosophila melanogaster [TaxId:7227]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2y8eb_ - Heterogens: SO4, GNP, MG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2y8eA (A:)
gtmssgdfgnplrkfklvflgeqsvgktslitrfmydsfdntyqatigidflsktmyled
rtvrlqlwdtagqerfrslipsyirdstvavvvyditntnsfhqtskwiddvrtergsdv
iimlvgnktdlsdkrqvsteegerkakelnvmfietsakagynvkqlfrrvaaalpgmd
Sequence, based on observed residues (ATOM records): (download)
>2y8eA (A:)
lrkfklvflgeqsvgktslitrfmydsfdntyqatigidflsktmyledrtvrlqlwdta
gqerfrslipsyirdstvavvvyditntnsfhqtskwiddvrtergsdviimlvgnktdl
sdkrqvsteegerkakelnvmfietsakagynvkqlfrrvaaalp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2y8eB (B:)
gtmssgdfgnplrkfklvflgeqsvgktslitrfmydsfdntyqatigidflsktmyled
rtvrlqlwdtagqerfrslipsyirdstvavvvyditntnsfhqtskwiddvrtergsdv
iimlvgnktdlsdkrqvsteegerkakelnvmfietsakagynvkqlfrrvaaalpgmd
Sequence, based on observed residues (ATOM records): (download)
>2y8eB (B:)
gnplrkfklvflgeqsvgktslitrfmydsfdntyqatigidflsktmyledrtvrlqlw
dtagqerfrslipsyirdstvavvvyditntnsfhqtskwiddvrtergsdviimlvgnk
tdlsdkrqvsteegerkakelnvmfietsakagynvkqlfrrvaaal