PDB entry 2y7h

View 2y7h on RCSB PDB site
Description: atomic model of the dna-bound methylase complex from the type i restriction-modification enzyme ecoki (m2s1). based on fitting into em map 1534.
Deposited on 2011-01-31, released 2011-02-09
The last revision was dated 2019-10-23, with a file datestamp of 2019-10-18.
Experiment type: EM
Resolution: 18 Å
R-factor: N/A
AEROSPACI score: -0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: type-1 restriction enzyme ecoki specificity protein
    Species: ESCHERICHIA COLI [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Type I restriction enzyme EcoKI M protein
    Species: ESCHERICHIA COLI [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Type I restriction enzyme EcoKI M protein
    Species: ESCHERICHIA COLI [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: 5'-d(*gp*tp*tp*cp*ap*ap*cp*gp*tp*cp*gp*ap*cp*gp *tp*gp*cp*ap*ap*c)-3'
    Species: Escherichia coli, synthetic [TaxId:562]
  • Chain 'E':
    Compound: 5'-d(*gp*tp*tp*gp*cp*ap*cp*gp*tp*cp*gp*ap*cp*gp *tp*tp*gp*ap*ap*c)-3'
    Species: Escherichia coli, synthetic [TaxId:562]
  • Heterogens: SAM

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >2y7hA (A:)
msagklpegwviapvstvttlirgvtykkeqainylkddylpliranniqngkfdttdlv
fvpknlvkesqkispediviamssgsksvvgksahqhlpfecsfgafcgvlrpeklifsg
fiahftksslyrnkisslsaganinnikpasfdlinipipplaeqkiiaekldtllaqvd
stkarfeqipqilkrfrqavlggavngkltekwrnfepqhsvfkklnfesiltelrngls
skpnesgvghpilrissvraghvdqndirflecseselnrhklqdgdllftryngslefv
gvcgllkklqhqnllypdklirarltkdalpeyieiffsspsarnammncvkttsgqkgi
sgkdiksqvvllppvkeqaeivrrveqlfayadtiekqvnnalarvnnltqsilakafrg
eltaqwraenpdlisgensaaallekikaeraasggkkasrkks

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >2y7hB (B:)
mnnndlvaklwklcdnlrdggvsyqnyvnelasllflkmcketgqeaeylpegyrwddlk
srigqeqlqfyrkmlvhlgeddkklvqavfhnvsttitepkqitalvsnmdsldwyngah
gksrddfgdmyegllqknanetksgagqyftprpliktiihllkpqprevvqdpaagtag
flieadryvksqtndlddldgdtqdfqihrafiglelvpgtrrlalmncllhdiegnldh
ggairlgntlgsdgenlpkahivatnppfgsaagtnitrtfvhptsnkqlcfmqhiietl
hpggraavvvpdnvlfeggkgtdirrdlmdkchlhtilrlptgifyaqgvktnvlfftkg
tvanpnqdknctddvwvydlrtnmpsfgkrtpftdehlqpfervygedphglsprtegew
sfnaeetevadseenkntdqhlatsrwrkfsrewirtaksdsldiswlkdkdsidadslp
epdvlaaeamgelvqalseldalmrelgasdeadlqrqlleeafggvke

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >2y7hC (C:)
mnnndlvaklwklcdnlrdggvsyqnyvnelasllflkmcketgqeaeylpegyrwddlk
srigqeqlqfyrkmlvhlgeddkklvqavfhnvsttitepkqitalvsnmdsldwyngah
gksrddfgdmyegllqknanetksgagqyftprpliktiihllkpqprevvqdpaagtag
flieadryvksqtndlddldgdtqdfqihrafiglelvpgtrrlalmncllhdiegnldh
ggairlgntlgsdgenlpkahivatnppfgsaagtnitrtfvhptsnkqlcfmqhiietl
hpggraavvvpdnvlfeggkgtdirrdlmdkchlhtilrlptgifyaqgvktnvlfftkg
tvanpnqdknctddvwvydlrtnmpsfgkrtpftdehlqpfervygedphglsprtegew
sfnaeetevadseenkntdqhlatsrwrkfsrewirtaksdsldiswlkdkdsidadslp
epdvlaaeamgelvqalseldalmrelgasdeadlqrqlleeafggvke

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.