PDB entry 2y7c

View 2y7c on RCSB PDB site
Description: atomic model of the ocr-bound methylase complex from the type i restriction-modification enzyme ecoki (m2s1). based on fitting into em map 1534.
Deposited on 2011-01-31, released 2011-02-09
The last revision was dated 2019-10-23, with a file datestamp of 2019-10-18.
Experiment type: EM
Resolution: 18 Å
R-factor: N/A
AEROSPACI score: -0.14 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: type-1 restriction enzyme ecoki specificity protein
    Species: ESCHERICHIA COLI [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Type I restriction enzyme EcoKI M protein
    Species: ESCHERICHIA COLI [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Type I restriction enzyme EcoKI M protein
    Species: ESCHERICHIA COLI [TaxId:562]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Gene 0.3 protein
    Species: Enterobacteria phage T7 [TaxId:10760]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Gene 0.3 protein
    Species: Enterobacteria phage T7 [TaxId:10760]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >2y7cA (A:)
    msagklpegwviapvstvttlirgvtykkeqainylkddylpliranniqngkfdttdlv
    fvpknlvkesqkispediviamssgsksvvgksahqhlpfecsfgafcgvlrpeklifsg
    fiahftksslyrnkisslsaganinnikpasfdlinipipplaeqkiiaekldtllaqvd
    stkarfeqipqilkrfrqavlggavngkltekwrnfepqhsvfkklnfesiltelrngls
    skpnesgvghpilrissvraghvdqndirflecseselnrhklqdgdllftryngslefv
    gvcgllkklqhqnllypdklirarltkdalpeyieiffsspsarnammncvkttsgqkgi
    sgkdiksqvvllppvkeqaeivrrveqlfayadtiekqvnnalarvnnltqsilakafrg
    eltaqwraenpdlisgensaaallekikaeraasggkkasrkks
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >2y7cB (B:)
    mnnndlvaklwklcdnlrdggvsyqnyvnelasllflkmcketgqeaeylpegyrwddlk
    srigqeqlqfyrkmlvhlgeddkklvqavfhnvsttitepkqitalvsnmdsldwyngah
    gksrddfgdmyegllqknanetksgagqyftprpliktiihllkpqprevvqdpaagtag
    flieadryvksqtndlddldgdtqdfqihrafiglelvpgtrrlalmncllhdiegnldh
    ggairlgntlgsdgenlpkahivatnppfgsaagtnitrtfvhptsnkqlcfmqhiietl
    hpggraavvvpdnvlfeggkgtdirrdlmdkchlhtilrlptgifyaqgvktnvlfftkg
    tvanpnqdknctddvwvydlrtnmpsfgkrtpftdehlqpfervygedphglsprtegew
    sfnaeetevadseenkntdqhlatsrwrkfsrewirtaksdsldiswlkdkdsidadslp
    epdvlaaeamgelvqalseldalmrelgasdeadlqrqlleeafggvke
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >2y7cC (C:)
    mnnndlvaklwklcdnlrdggvsyqnyvnelasllflkmcketgqeaeylpegyrwddlk
    srigqeqlqfyrkmlvhlgeddkklvqavfhnvsttitepkqitalvsnmdsldwyngah
    gksrddfgdmyegllqknanetksgagqyftprpliktiihllkpqprevvqdpaagtag
    flieadryvksqtndlddldgdtqdfqihrafiglelvpgtrrlalmncllhdiegnldh
    ggairlgntlgsdgenlpkahivatnppfgsaagtnitrtfvhptsnkqlcfmqhiietl
    hpggraavvvpdnvlfeggkgtdirrdlmdkchlhtilrlptgifyaqgvktnvlfftkg
    tvanpnqdknctddvwvydlrtnmpsfgkrtpftdehlqpfervygedphglsprtegew
    sfnaeetevadseenkntdqhlatsrwrkfsrewirtaksdsldiswlkdkdsidadslp
    epdvlaaeamgelvqalseldalmrelgasdeadlqrqlleeafggvke
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2y7cD (D:)
    mamsnmtynnvfdhayemlkeniryddirdtddlhdaihmaadnavphyyadifsvmase
    gidlefedsglmpdtkdvirilqariyeqltidlwedaedllneyleeveeyeede
    

    Sequence, based on observed residues (ATOM records):
    >2y7cD (D:)
    mtynnvfdhayemlkeniryddirdtddlhdaihmaadnavphyyadifsvmasegidle
    fedsglmpdtkdvirilqariyeqltidlwedaedllneyleeveey
    

  • Chain 'E':
    Sequence, based on SEQRES records:
    >2y7cE (E:)
    mamsnmtynnvfdhayemlkeniryddirdtddlhdaihmaadnavphyyadifsvmase
    gidlefedsglmpdtkdvirilqariyeqltidlwedaedllneyleeveeyeede
    

    Sequence, based on observed residues (ATOM records):
    >2y7cE (E:)
    mtynnvfdhayemlkeniryddirdtddlhdaihmaadnavphyyadifsvmasegidle
    fedsglmpdtkdvirilqariyeqltidlwedaedllneyleevee