PDB entry 2y6s

View 2y6s on RCSB PDB site
Description: Structure of an Ebolavirus-protective antibody in complex with its mucin-domain linear epitope
Deposited on 2011-01-25, released 2012-01-11
The last revision was dated 2012-02-22, with a file datestamp of 2012-02-17.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.2386
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'C':
    Compound: light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 2Y6S (0-216)
  • Chain 'D':
    Compound: heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 2Y6S (0-212)
  • Chain 'H':
    Compound: heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 2Y6S (0-212)
  • Chain 'L':
    Compound: light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 2Y6S (0-216)
  • Chain 'P':
    Compound: Envelope glycoprotein
    Species: ZAIRE EBOLAVIRUS, synthetic [TaxId:128951]
    Database cross-references and differences (RAF-indexed):
  • Chain 'Q':
    Compound: Envelope glycoprotein
    Species: ZAIRE EBOLAVIRUS, synthetic [TaxId:128951]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >2y6sC (C:)
divltqspaslavslgqratiscrasksvstsgysymhwnqqkpgqpprlliylvsnles
gvparfsgsgsgtdftlniapveeedaatyycqhiaeltrtfgggtkleikradaaptvs
ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
stltltkdeyerhnsytceathktstspivksfnrne

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2y6sD (D:)
qvqlqqsgpelvkpgasvkmsckasgytftdyviswvkqrtgqglewigefypgtdstyy
tenfkgratltadkssktaymqlssltsedsavyfcatafdywgqgttltvssaattpps
vyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsss
vtvpsstwpsetvtcnvahpasstkvdkkivpr

    Sequence, based on observed residues (ATOM records):
    >2y6sD (D:)
qvqlqqsgpelvkpgasvkmsckasgytftdyviswvkqrtgqglewigefypgtdstyy
tenfkgratltadkssktaymqlssltsedsavyfcatafdywgqgttltvssaattpps
vyplapsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsssvtvpsst
wpsetvtcnvahpasstkvdkkivpr

  • Chain 'H':
    Sequence, based on SEQRES records:
    >2y6sH (H:)
qvqlqqsgpelvkpgasvkmsckasgytftdyviswvkqrtgqglewigefypgtdstyy
tenfkgratltadkssktaymqlssltsedsavyfcatafdywgqgttltvssaattpps
vyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsss
vtvpsstwpsetvtcnvahpasstkvdkkivpr

    Sequence, based on observed residues (ATOM records):
    >2y6sH (H:)
qvqlqqsgpelvkpgasvkmsckasgytftdyviswvkqrtgqglewigefypgtdstyy
tenfkgratltadkssktaymqlssltsedsavyfcatafdywgqgttltvssaattpps
vyplapsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsssvtvpsst
wpsetvtcnvahpasstkvdkkivpr

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >2y6sL (L:)
divltqspaslavslgqratiscrasksvstsgysymhwnqqkpgqpprlliylvsnles
gvparfsgsgsgtdftlniapveeedaatyycqhiaeltrtfgggtkleikradaaptvs
ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
stltltkdeyerhnsytceathktstspivksfnrne

  • Chain 'P':
    Sequence, based on SEQRES records:
    >2y6sP (P:)
gklglitntiagvagli

    Sequence, based on observed residues (ATOM records):
    >2y6sP (P:)
klglitntiagvagl

  • Chain 'Q':
    Sequence, based on SEQRES records:
    >2y6sQ (Q:)
gklglitntiagvagli

    Sequence, based on observed residues (ATOM records):
    >2y6sQ (Q:)
klglitntiagvagl