PDB entry 2y6p

View 2y6p on RCSB PDB site
Description: Evidence for a Two-Metal-Ion-Mechanism in the Kdo- Cytidylyltransferase KdsB
Class: transferase
Keywords: transferase, lipid a
Deposited on 2011-01-25, released 2011-08-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-07-17, with a file datestamp of 2019-07-12.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 3-deoxy-manno-octulosonate cytidylyltransferase
    Species: Aquifex aeolicus [TaxId:63363]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2y6pa_
  • Chain 'B':
    Compound: 3-deoxy-manno-octulosonate cytidylyltransferase
    Species: Aquifex aeolicus [TaxId:63363]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2y6pb_
  • Chain 'C':
    Compound: 3-deoxy-manno-octulosonate cytidylyltransferase
    Species: Aquifex aeolicus [TaxId:63363]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2y6pc_
  • Heterogens: CTP, MG, IPA, BME, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2y6pA (A:)
mrraviiparlgstrlkekplknllgkplirwvveglvktgervilatdservkevvedl
cevfltpsdlpsgsdrvlyvvrdldvdliinyqgdepfvyeediklifrelekgervvtl
arkdkeayerpedvkvvldregyalyfsrspipyfrkndtfyplkhvgiygfrketlmef
gamppskleqiegleqlrllengikikvlitenyyhgvdteedlkiveeklknl

    Sequence, based on observed residues (ATOM records): (download) 
    >2y6pA (A:)
rraviiparlgstrlkekplknllgkplirwvveglvktgervilatdservkevvedlc
evfltpsdlpsgsdrvlyvvrdldvdliinyqgdepfvyeediklifrelekgervvtla
rkdkeayerpedvkvvldregyalyfsrspipyfrkndtfyplkhvgiygfrketlmefg
amppskleqiegleqlrllengikikvlitenyyhgvdteedlkiveeklk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2y6pB (B:)
mrraviiparlgstrlkekplknllgkplirwvveglvktgervilatdservkevvedl
cevfltpsdlpsgsdrvlyvvrdldvdliinyqgdepfvyeediklifrelekgervvtl
arkdkeayerpedvkvvldregyalyfsrspipyfrkndtfyplkhvgiygfrketlmef
gamppskleqiegleqlrllengikikvlitenyyhgvdteedlkiveeklknl

    Sequence, based on observed residues (ATOM records): (download) 
    >2y6pB (B:)
rraviiparlgstrlkekplknllgkplirwvveglvktgervilatdservkevvedlc
evfltpsdlpsgsdrvlyvvrdldvdliinyqgdepfvyeediklifrelekgervvtla
rkdkeayerpedvkvvldregyalyfsrspipyfrkndtfyplkhvgiygfrketlmefg
amppskleqiegleqlrllengikikvlitenyyhgvdteedlkiveeklknl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2y6pC (C:)
mrraviiparlgstrlkekplknllgkplirwvveglvktgervilatdservkevvedl
cevfltpsdlpsgsdrvlyvvrdldvdliinyqgdepfvyeediklifrelekgervvtl
arkdkeayerpedvkvvldregyalyfsrspipyfrkndtfyplkhvgiygfrketlmef
gamppskleqiegleqlrllengikikvlitenyyhgvdteedlkiveeklknl

    Sequence, based on observed residues (ATOM records): (download) 
    >2y6pC (C:)
raviiparlgstrlkekplknllgkplirwvveglvktgervilatdservkevvedlce
vfltpsdlpsgsdrvlyvvrdldvdliinyqgdepfvyeediklifrelekgervvtlar
kdkeayerpedvkvvldregyalyfsrspipyfrkndtfyplkhvgiygfrketlmefga
mppskleqiegleqlrllengikikvlitenyyhgvdteedlkiveekl