PDB entry 2y6i

View 2y6i on RCSB PDB site
Description: crystal structure of collagenase g from clostridium histolyticum in complex with isoamylphosphonyl-gly-pro-ala at 3.25 angstrom resolution
Deposited on 2011-01-21, released 2011-09-28
The last revision was dated 2015-09-16, with a file datestamp of 2015-09-11.
Experiment type: XRAY
Resolution: 3.25 Å
R-factor: N/A
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: collagenase
    Species: Clostridium histolyticum [TaxId:1498]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9X721 (23-End)
      • expression tag (21-22)
      • see remark 999 (479)
      • see remark 999 (569)
      • see remark 999 (694)
  • Chain 'B':
    Compound: isoamylphosphonyl-gly-pro-ala
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 2Y6I (0-3)
  • Heterogens: ZN, FLC, TRS, PEG, 1PE, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2y6iA (A:)
mgsshhhhhhssgenlyfqggtmydfeylnglsyteltnliknikwnqinglfnystgsq
kffgdknrvqaiinalqesgrtytandmkgietftevlragfylgyyndglsylndrnfq
dkcipamiaiqknpnfklgtavqdevitslgklignasanaevvnncvpvlkqfrenlnq
yapdyvkgtavnelikgiefdfsgaayekdvktmpwygkidpfinelkalglygnitsat
ewasdvgiyylskfglystnrndivqslekavdmykygkiafvameritwdydgigsngk
kvdhdkflddaekhylpktytfdngtfiiragdkvseekikrlywasrevksqfhrvvgn
dkalevgnaddvltmkifnspeeykfntningvstdngglyieprgtfytyertpqqsif
sleelfrheythylqarylvdglwgqgpfyeknrltwfdegtaeffagstrtsgvlprkl
ilgylakdkvdhryslkktlnsgyddsdwmfynygfavahylyekdmptfikmnkailnt
dvksydeiikklsddanknteyqnhiqelvdkyqgagiplvsddylkdhgykkasevyse
iskaasltntsvtaeksqyfntftlrgtytgetskgefkdwdemskkldgtleslaknsw
sgyktltayftnyrvtsdnkvqydvvfhgvltdngdisnnkapiakvtgpstgavgrnie
fsgkdskdedgkivsydwdfgdgatsrgknsvhaykkagtynvtlkvtddkgatatesft
ieikn

    Sequence, based on observed residues (ATOM records):
    >2y6iA (A:)
tmydfeylnglsyteltnliknikwnqinglfnystgsqkffgdknrvqaiinalqesgr
tytandmkgietftevlragfylgyyndglsylndrnfqdkcipamiaiqknpnfklgta
vqdevitslgklignasanaevvnncvpvlkqfrenlnqyapdyvkgtavnelikgiefd
fsgaayekdvktmpwygkidpfinelkalglygnitsatewasdvgiyylskfglystnr
ndivqslekavdmykygkiafvameritwdydgigsngkkvdhdkflddaekhylpktyt
fdngtfiiragdkvseekikrlywasrevksqfhrvvgndkalevgnaddvltmkifnsp
eeykfntningvstdngglyieprgtfytyertpqqsifsleelfrheythylqarylvd
glwgqgpfyeknrltwfdegtaeffagstrtsgvlprklilgylakdkvdhryslkktln
sdsdwmfynygfavahylyekdmptfikmnkailntdvksydeiikklsddanknteyqn
hiqelvdkyqgagiplvsddylkdhgykkasevyseiskaasltntsvtaeksqyfntft
lrgtytgetskgefkdwdemskkldgtleslaknswsgyktltayftnyrvtsdnkvqyd
vvfhgvltdng

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >2y6iB (B:)
xgpa