PDB entry 2y5y

View 2y5y on RCSB PDB site
Description: crystal structure of lacy in complex with an affinity inactivator
Deposited on 2011-01-19, released 2011-06-15
The last revision was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 3.38 Å
R-factor: N/A
AEROSPACI score: 0.14 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: lactose permease
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02920
      • engineered mutation (116)
      • engineered mutation (121)
      • engineered mutation (147)
      • engineered mutation (153)
      • engineered mutation (175)
      • engineered mutation (233)
      • engineered mutation (332)
      • engineered mutation (352)
      • engineered mutation (354)
  • Chain 'B':
    Compound: lactose permease
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02920
      • engineered mutation (116)
      • engineered mutation (121)
      • engineered mutation (147)
      • engineered mutation (153)
      • engineered mutation (175)
      • engineered mutation (233)
      • engineered mutation (332)
      • engineered mutation (352)
      • engineered mutation (354)
  • Heterogens: BA, TGA

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2y5yA (A:)
    myylkntnfwmfglffffyffimgayfpffpiwlhdinhisksdtgiifaaislfsllfq
    plfgllsdklglrkyllwiitgmlvmfapffififgpllqynilvgsivggiylgfsfna
    gcpaveafiekvsrrsnfefgrarmfgavgwalvasivgimftinnqfvfwlgsgmalil
    avllffaktdapssatvanavganhsafslklalelfrqpklwflslyvigvsstydvfd
    qqfanfftsffatgeqgtrvfgyvttmgellnasimffapliinriggknalllagtims
    vriigssfatsalevvilktlhmfevpfllvgsfkyitsqfevrfsatiylvafaffkql
    amifmsvlagnmyesigfqgaylvlglvalgftlisvftlsgpgplsllrrqvnevahhh
    hhh
    

    Sequence, based on observed residues (ATOM records):
    >2y5yA (A:)
    lkntnfwmfglffffyffimgayfpffpiwlhdinhisksdtgiifaaislfsllfqplf
    gllsdklglrkyllwiitgmlvmfapffififgpllqynilvgsivggiylgfsfnagcp
    aveafiekvsrrsnfefgrarmfgavgwalvasivgimftinnqfvfwlgsgmalilavl
    lffakanhsafslklalelfrqpklwflslyvigvsstydvfdqqfanfftsffatgeqg
    trvfgyvttmgellnasimffapliinriggknalllagtimsvriigssfatsalevvi
    lktlhmfevpfllvgsfkyitsqfevrfsatiylvafaffkqlamifmsvlagnmyesig
    fqgaylvlglvalgftlisvftlsgp
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2y5yB (B:)
    myylkntnfwmfglffffyffimgayfpffpiwlhdinhisksdtgiifaaislfsllfq
    plfgllsdklglrkyllwiitgmlvmfapffififgpllqynilvgsivggiylgfsfna
    gcpaveafiekvsrrsnfefgrarmfgavgwalvasivgimftinnqfvfwlgsgmalil
    avllffaktdapssatvanavganhsafslklalelfrqpklwflslyvigvsstydvfd
    qqfanfftsffatgeqgtrvfgyvttmgellnasimffapliinriggknalllagtims
    vriigssfatsalevvilktlhmfevpfllvgsfkyitsqfevrfsatiylvafaffkql
    amifmsvlagnmyesigfqgaylvlglvalgftlisvftlsgpgplsllrrqvnevahhh
    hhh
    

    Sequence, based on observed residues (ATOM records):
    >2y5yB (B:)
    lkntnfwmfglffffyffimgayfpffpiwlhdinhisksdtgiifaaislfsllfqplf
    gllsdklglrkyllwiitgmlvmfapffififgpllqynilvgsivggiylgfsfnagcp
    aveafiekvsrrsnfefgrarmfgavgwalvasivgimftinnqfvfwlgsgmalilavl
    lffaktvanavganhsafslklalelfrqpklwflslyvigvsstydvfdqqfanfftsf
    fatgeqgtrvfgyvttmgellnasimffapliinriggknalllagtimsvriigssfat
    salevvilktlhmfevpfllvgsfkyitsqfevrfsatiylvafaffkqlamifmsvlag
    nmyesigfqgaylvlglvalgftlisvftlsgpg