PDB entry 2y5i

View 2y5i on RCSB PDB site
Description: s100z from zebrafish in complex with calcium
Class: metal-binding protein
Keywords: metal-binding protein, ef-hand, calcium regulation, oligomerisation, neuronal development, spine2, structural proteomics in europe 2
Deposited on 2011-01-13, released 2011-07-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-08-24, with a file datestamp of 2011-08-19.
Experiment type: XRAY
Resolution: 2.03 Å
R-factor: 0.1737
AEROSPACI score: 0.46 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: s100 calcium binding protein z
    Species: Danio rerio [TaxId:7955]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2y5ia_
  • Chain 'B':
    Compound: s100 calcium binding protein z
    Species: Danio rerio [TaxId:7955]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2y5ib_
  • Chain 'C':
    Compound: s100 calcium binding protein z
    Species: Danio rerio [TaxId:7955]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2y5ic_
  • Chain 'D':
    Compound: s100 calcium binding protein z
    Species: Danio rerio [TaxId:7955]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2y5id_
  • Chain 'E':
    Compound: s100 calcium binding protein z
    Species: Danio rerio [TaxId:7955]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2y5ie_
  • Chain 'F':
    Compound: s100 calcium binding protein z
    Species: Danio rerio [TaxId:7955]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2y5if_
  • Heterogens: CA, IPA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2y5iA (A:)
mpsklegamdalitvfhnysgsegdkyklskgelkellnaeltdflmsqkdpmlvekimn
dldsnkdnevdfnefvvlvaaltvacndffqeqqkkrsk

    Sequence, based on observed residues (ATOM records): (download) 
    >2y5iA (A:)
sklegamdalitvfhnysgsegdkyklskgelkellnaeltdflmsqkdpmlvekimndl
dsnkdnevdfnefvvlvaaltvacndffqeqqkkrsk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2y5iB (B:)
mpsklegamdalitvfhnysgsegdkyklskgelkellnaeltdflmsqkdpmlvekimn
dldsnkdnevdfnefvvlvaaltvacndffqeqqkkrsk

    Sequence, based on observed residues (ATOM records): (download) 
    >2y5iB (B:)
sklegamdalitvfhnysgsegdkyklskgelkellnaeltdflmsqkdpmlvekimndl
dsnkdnevdfnefvvlvaaltvacndffqeqqkkrs

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2y5iC (C:)
mpsklegamdalitvfhnysgsegdkyklskgelkellnaeltdflmsqkdpmlvekimn
dldsnkdnevdfnefvvlvaaltvacndffqeqqkkrsk

    Sequence, based on observed residues (ATOM records): (download) 
    >2y5iC (C:)
psklegamdalitvfhnysgsegdkyklskgelkellnaeltdflmsqkdpmlvekimnd
ldsnkdnevdfnefvvlvaaltvacndffqeqqkkrsk

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2y5iD (D:)
mpsklegamdalitvfhnysgsegdkyklskgelkellnaeltdflmsqkdpmlvekimn
dldsnkdnevdfnefvvlvaaltvacndffqeqqkkrsk

    Sequence, based on observed residues (ATOM records): (download) 
    >2y5iD (D:)
psklegamdalitvfhnysgsegdkyklskgelkellnaeltdflmsqkdpmlvekimnd
ldsnkdnevdfnefvvlvaaltvacndffqeqqkkrsk

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2y5iE (E:)
mpsklegamdalitvfhnysgsegdkyklskgelkellnaeltdflmsqkdpmlvekimn
dldsnkdnevdfnefvvlvaaltvacndffqeqqkkrsk

    Sequence, based on observed residues (ATOM records): (download) 
    >2y5iE (E:)
psklegamdalitvfhnysgsegdkyklskgelkellnaeltdflmsqkdpmlvekimnd
ldsnkdnevdfnefvvlvaaltvacndffqeqqkkrs

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2y5iF (F:)
mpsklegamdalitvfhnysgsegdkyklskgelkellnaeltdflmsqkdpmlvekimn
dldsnkdnevdfnefvvlvaaltvacndffqeqqkkrsk

    Sequence, based on observed residues (ATOM records): (download) 
    >2y5iF (F:)
psklegamdalitvfhnysgsegdkyklskgelkellnaeltdflmsqkdpmlvekimnd
ldsnkdnevdfnefvvlvaaltvacndffqeqqkkrsk