PDB entry 2y3r

View 2y3r on RCSB PDB site
Description: structure of the tirandamycin-bound fad-dependent tirandamycin oxidase taml in p21 space group
Deposited on 2010-12-22, released 2011-06-29
The last revision was dated 2019-05-08, with a file datestamp of 2019-05-03.
Experiment type: XRAY
Resolution: 1.79 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: taml
    Species: STREPTOMYCES SP. 307-9 [TaxId:529089]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: taml
    Species: STREPTOMYCES SP. 307-9 [TaxId:529089]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: taml
    Species: STREPTOMYCES SP. 307-9 [TaxId:529089]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: taml
    Species: STREPTOMYCES SP. 307-9 [TaxId:529089]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: FAD, TIR, MG, GOL, CL, TRK, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2y3rA (A:)
    mgshhhhhhhhgsdydipttenlyfqgsefmkhidsvapgdiryedlrrgenlrfvgdpe
    eihlvgsaaeieqvlsravrsgkrvavrsgghcyedfvansdvrvvmdmsrlsavgfdee
    rgafaveagatlgavyktlfrvwgvtlpggacpdvgagghilgggygplsrmhgsivdyl
    havevvvvdasgdartviatrepsdpnhdlwwahtgggggnfgvvvrywlrtaeadvppe
    pgrllprppaevllnttvwpwegldeaafarlvrnhgrwfeqnsgpdspwcdlysvlalt
    rsqsgalamttqldatgpdaekrletylaavsegvgvqphsdtrrlpwlhstrwpgiagd
    gdmtgrakikaayarrsfddrqigtlytrltstdydnpagvvaliayggkvnavpadrta
    vaqrdsilkivyvttwedpaqdpvhvrwirelyrdvyadtggvpvpggaadgayvnypdv
    dladeewntsgvpwselyykdayprlqavkarwdprnvfrhalsvrvppa
    

    Sequence, based on observed residues (ATOM records):
    >2y3rA (A:)
    idsvapgdiryedlrrgenlrfvgdpeeihlvgsaaeieqvlsravrsgkrvavrsgghc
    yedfvansdvrvvmdmsrlsavgfdeergafaveagatlgavyktlfrvwgvtlpggacp
    dvgagghilgggygplsrmhgsivdylhavevvvvdasgdartviatrepsdpnhdlwwa
    htgggggnfgvvvrywlrtaeppepgrllprppaevllnttvwpwegldeaafarlvrnh
    grwfeqnsgpdspwcdlysvlaltrsqsgalamttqldatgpdaekrletylaavsegvg
    vqphsdtrrlpwlhstrwpgiagdgdmtgrakikaayarrsfddrqigtlytrltstdyd
    nagvvaliayggkvnavpadrtavaqrdsilkivyvttwedpaqdpvhvrwirelyrdvy
    adtggvpvpggaadgayvnypdvdladeewntsgvpwselyykdayprlqavkarwdprn
    vfrhalsvrvpp
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2y3rB (B:)
    mgshhhhhhhhgsdydipttenlyfqgsefmkhidsvapgdiryedlrrgenlrfvgdpe
    eihlvgsaaeieqvlsravrsgkrvavrsgghcyedfvansdvrvvmdmsrlsavgfdee
    rgafaveagatlgavyktlfrvwgvtlpggacpdvgagghilgggygplsrmhgsivdyl
    havevvvvdasgdartviatrepsdpnhdlwwahtgggggnfgvvvrywlrtaeadvppe
    pgrllprppaevllnttvwpwegldeaafarlvrnhgrwfeqnsgpdspwcdlysvlalt
    rsqsgalamttqldatgpdaekrletylaavsegvgvqphsdtrrlpwlhstrwpgiagd
    gdmtgrakikaayarrsfddrqigtlytrltstdydnpagvvaliayggkvnavpadrta
    vaqrdsilkivyvttwedpaqdpvhvrwirelyrdvyadtggvpvpggaadgayvnypdv
    dladeewntsgvpwselyykdayprlqavkarwdprnvfrhalsvrvppa
    

    Sequence, based on observed residues (ATOM records):
    >2y3rB (B:)
    dsvapgdiryedlrrgenlrfvgdpeeihlvgsaaeieqvlsravrsgkrvavrsgghcy
    edfvansdvrvvmdmsrlsavgfdeergafaveagatlgavyktlfrvwgvtlpggacpd
    vgagghilgggygplsrmhgsivdylhavevvvvdasgdartviatrepsdpnhdlwwah
    tgggggnfgvvvrywlrtapepgrllprppaevllnttvwpwegldeaafarlvrnhgrw
    feqnsgpdspwcdlysvlaltrsqsgalamttqldatgpdaekrletylaavsegvgvqp
    hsdtrrlpwlhstrwpgiagdgdmtgrakikaayarrsfddrqigtlytrltstdpagvv
    aliayggkvnavpadrtavaqrdsilkivyvttwedpaqdpvhvrwirelyrdvyadtgg
    vpvpggaadgayvnypdvdladeewntsgvpwselyykdayprlqavkarwdprnvfrha
    lsvrvpp
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >2y3rC (C:)
    mgshhhhhhhhgsdydipttenlyfqgsefmkhidsvapgdiryedlrrgenlrfvgdpe
    eihlvgsaaeieqvlsravrsgkrvavrsgghcyedfvansdvrvvmdmsrlsavgfdee
    rgafaveagatlgavyktlfrvwgvtlpggacpdvgagghilgggygplsrmhgsivdyl
    havevvvvdasgdartviatrepsdpnhdlwwahtgggggnfgvvvrywlrtaeadvppe
    pgrllprppaevllnttvwpwegldeaafarlvrnhgrwfeqnsgpdspwcdlysvlalt
    rsqsgalamttqldatgpdaekrletylaavsegvgvqphsdtrrlpwlhstrwpgiagd
    gdmtgrakikaayarrsfddrqigtlytrltstdydnpagvvaliayggkvnavpadrta
    vaqrdsilkivyvttwedpaqdpvhvrwirelyrdvyadtggvpvpggaadgayvnypdv
    dladeewntsgvpwselyykdayprlqavkarwdprnvfrhalsvrvppa
    

    Sequence, based on observed residues (ATOM records):
    >2y3rC (C:)
    dsvapgdiryedlrrgenlrfvgdpeeihlvgsaaeieqvlsravrsgkrvavrsgghcy
    edfvansdvrvvmdmsrlsavgfdeergafaveagatlgavyktlfrvwgvtlpggacpd
    vgagghilgggygplsrmhgsivdylhavevvvvdasgdartviatrepsdpnhdlwwah
    tgggggnfgvvvrywlrtaeppepgrllprppaevllnttvwpwegldeaafarlvrnhg
    rwfeqnsgpdspwcdlysvlaltrsqsgalamttqldatgpdaekrletylaavsegvgv
    qphsdtrrlpwlhstrwpgiagdgdmtgrakikaayarrsfddrqigtlytrltstddnp
    agvvaliayggkvnavpadrtavaqrdsilkivyvttwedpaqdpvhvrwirelyrdvya
    dtggvpvpggaadgayvnypdvdladeewntsgvpwselyykdayprlqavkarwdprnv
    frhalsvrvppa
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >2y3rD (D:)
    mgshhhhhhhhgsdydipttenlyfqgsefmkhidsvapgdiryedlrrgenlrfvgdpe
    eihlvgsaaeieqvlsravrsgkrvavrsgghcyedfvansdvrvvmdmsrlsavgfdee
    rgafaveagatlgavyktlfrvwgvtlpggacpdvgagghilgggygplsrmhgsivdyl
    havevvvvdasgdartviatrepsdpnhdlwwahtgggggnfgvvvrywlrtaeadvppe
    pgrllprppaevllnttvwpwegldeaafarlvrnhgrwfeqnsgpdspwcdlysvlalt
    rsqsgalamttqldatgpdaekrletylaavsegvgvqphsdtrrlpwlhstrwpgiagd
    gdmtgrakikaayarrsfddrqigtlytrltstdydnpagvvaliayggkvnavpadrta
    vaqrdsilkivyvttwedpaqdpvhvrwirelyrdvyadtggvpvpggaadgayvnypdv
    dladeewntsgvpwselyykdayprlqavkarwdprnvfrhalsvrvppa
    

    Sequence, based on observed residues (ATOM records):
    >2y3rD (D:)
    dsvapgdiryedlrrgenlrfvgdpeeihlvgsaaeieqvlsravrsgkrvavrsgghcy
    edfvansdvrvvmdmsrlsavgfdeergafaveagatlgavyktlfrvwgvtlpggacpd
    vgagghilgggygplsrmhgsivdylhavevvvvdasgdartviatrepsdpnhdlwwah
    tgggggnfgvvvrywlrtappepgrllprppaevllnttvwpwegldeaafarlvrnhgr
    wfeqnsgpdspwcdlysvlaltrsqsgalamttqldatgpdaekrletylaavsegvgvq
    phsdtrrlpwlhstrwpgiagdgdmtgrakikaayarrsfddrqigtlytrltstydnpa
    gvvaliayggkvnavpadrtavaqrdsilkivyvttwedpaqdpvhvrwirelyrdvyad
    tggvpvpggaadgayvnypdvdladeewntsgvpwselyykdayprlqavkarwdprnvf
    rhalsvrvppa