PDB entry 2xzq

View 2xzq on RCSB PDB site
Description: crystal structure analysis of the anti-(4-hydroxy-3-nitrophenyl)- acetyl murine germline monoclonal antibody bbe6.12h3 fab fragment in complex with a phage display derived dodecapeptide yqlrpnaetlrf
Deposited on 2010-12-01, released 2011-12-28
The last revision was dated 2012-02-15, with a file datestamp of 2012-02-10.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.2407
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: anti-np murine germline monoclonal antibody bbe6.12h3, heavy chain
    Species: MUS MUSCULUS [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 2XZQ (0-219)
  • Chain 'L':
    Compound: anti-np murine germline monoclonal antibody bbe6.12h3, light chain
    Species: MUS MUSCULUS [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 2XZQ (0-210)
  • Chain 'P':
    Compound: phage display derived antigen
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 2XZQ (0-End)
  • Heterogens: ZN, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'H':
    Sequence, based on SEQRES records:
    >2xzqH (H:)
    qvqlqqpgaelvkpgasvklsckasgytftsywmhwvkqrpgrglewigridpnsggtay
    nekfkskatlqvdkpsstaymqlssltsedsavyycarydyyggsyfdywgqgttltvss
    akttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvvwnsgsissgvhtfpavlqqg
    lytlsssvtvpsspwpsetvtcnvahpasstkvdkaigpr
    

    Sequence, based on observed residues (ATOM records):
    >2xzqH (H:)
    qvqlqqpgaelvkpgasvklsckasgytftsywmhwvkqrpgrglewigridpnsggtay
    nekfkskatlqvdkpsstaymqlssltsedsavyycarydyyggsyfdywgqgttltvss
    akttppsvyplapgssmvtlgclvkgyfpepvtvvwnsgsissgvhtfpavlqqglytls
    ssvtvpsspwpsetvtcnvahpasstkvdkaigpr
    

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >2xzqL (L:)
    qavvtqesalttspgetvtltcrsstgavttsnyanwvqekpdhlftgliggtnnrapgv
    parfsgsligdkaaltitggqtedeaiyfcalwysnhwvfgggtkltvlgqpksspsvtl
    fppsseeletnkatlvctitdfypgvvtvdwsgdgtpveqgmettqpskqsnnkymassy
    ltltarawerhsqyscqvtheghtvekslsr
    

  • Chain 'P':
    Sequence, based on SEQRES records:
    >2xzqP (P:)
    yqlrpnaetlrf
    

    Sequence, based on observed residues (ATOM records):
    >2xzqP (P:)
    yqlrpnaet