PDB entry 2xy6

View 2xy6 on RCSB PDB site
Description: Crystal structure of a salicylic aldehyde basepair in complex with fragment DNA polymerase I from Bacillus stearothermophilus
Deposited on 2010-11-15, released 2011-07-27
The last revision was dated 2012-03-28, with a file datestamp of 2012-03-23.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.21519
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase I
    Species: GEOBACILLUS STEAROTHERMOPHILUS [TaxId:1422]
    Database cross-references and differences (RAF-indexed):
    • Uniprot E1C9K5 (1-580)
      • expression tag (0)
  • Chain 'B':
    Compound: 5'-d(*gp*ap*cp*cp*sayp*tp*cp*cp*cp*tp)-3'
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'C':
    Compound: 5'-d(*ap*gp*gp*gp*ap*sayp*gp*gp*tp*cp)-3'
    Species: synthetic construct, synthetic [TaxId:32630]
  • Heterogens: SO4, MES, MRD, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >2xy6A (A:)
takmaftladrvteemladkaalvvevveenyhdapivgiavvnehgrfflrpetaladp
qfvawlgdetkkksmfdskraavalkwkgielcgvsfdlllaaylldpaqgvddvaaaak
mkqyeavrpdeavygkgakravpdepvlaehlvrkaaaiwalerpfldelrrneqdrllv
eleqplssilaemefagvkvdtkrleqmgeelaeqlrtveqriyelagqefninspkqlg
vilfeklqlpvlkksktgystsadvleklapyheivenilhyrqlgklqstyiegllkvv
rpdtkkvhtifnqaltqtgrlsstepnlqnipirleegrkirqafvpsesdwlifaadys
qielrvlahiaeddnlmeafrrdldihtktamdifqvsedevtpnmrrqakavnfgivyg
isdyglaqnlnisrkeaaefieryfesfpgvkrymenivqeakqkgyvttllhrrrylpd
itsrnfnvrsfaermamntpiqgsaadiikkamidlnarlkeerlqarlllqvhdelile
apkeemerlcrlvpevmeqavtlrvplkvdyhygstwydak

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.