PDB entry 2xwd

View 2xwd on RCSB PDB site
Description: x-ray structure of acid-beta-glucosidase with 5n,6o-(n'-(n-octyl) imino)nojirimycin in the active site
Deposited on 2010-11-01, released 2011-09-14
The last revision was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 2.66 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: glucosylceramidase
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04062 (2-498)
      • expression tag (1)
      • variant (496)
  • Chain 'B':
    Compound: glucosylceramidase
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04062 (2-498)
      • expression tag (1)
      • variant (496)
  • Heterogens: SO4, LGS, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >2xwdA (A:)
    efarpcipksfgyssvvcvcnatycdsfdpptfpalgtfsryestrsgrrmelsmgpiqa
    nhtgtgllltlqpeqkfqkvkgfggamtdaaalnilalsppaqnlllksyfseegigyni
    irvpmascdfsirtytyadtpddfqlhnfslpeedtklkiplihralqlaqrpvsllasp
    wtsptwlktngavngkgslkgqpgdiyhqtwaryfvkfldayaehklqfwavtaenepsa
    gllsgypfqclgftpehqrdfiardlgptlansthhnvrllmlddqrlllphwakvvltd
    peaakyvhgiavhwyldflapakatlgethrlfpntmlfaseacvgskfweqsvrlgswd
    rgmqyshsiitnllyhvvgwtdwnlalnpeggpnwvrnfvdspiivditkdtfykqpmfy
    hlghfskfipegsqrvglvasqkndldavalmhpdgsavvvvlnrsskdvpltikdpavg
    fletispgysihtylwhrqllvdtm
    

    Sequence, based on observed residues (ATOM records):
    >2xwdA (A:)
    farpcipksfgyssvvcvcnatycdsfpalgtfsryestrsgrrmelsmgpiqanhtgtg
    llltlqpeqkfqkvkgfggamtdaaalnilalsppaqnlllksyfseegigyniirvpma
    scdfsirtytyadtpddfqlhnfslpeedtklkiplihralqlaqrpvsllaspwtsptw
    lktngavngkgslkgqpgdiyhqtwaryfvkfldayaehklqfwavtaenepsagllsgy
    pfqclgftpehqrdfiardlgptlansthhnvrllmlddqrlllphwakvvltdpeaaky
    vhgiavhwyldflapakatlgethrlfpntmlfaseacvgskfweqsvrlgswdrgmqys
    hsiitnllyhvvgwtdwnlalnpeggpnwvrnfvdspiivditkdtfykqpmfyhlghfs
    kfipegsqrvglvasqkndldavalmhpdgsavvvvlnrsskdvpltikdpavgfletis
    pgysihtylwhrq
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >2xwdB (B:)
    efarpcipksfgyssvvcvcnatycdsfdpptfpalgtfsryestrsgrrmelsmgpiqa
    nhtgtgllltlqpeqkfqkvkgfggamtdaaalnilalsppaqnlllksyfseegigyni
    irvpmascdfsirtytyadtpddfqlhnfslpeedtklkiplihralqlaqrpvsllasp
    wtsptwlktngavngkgslkgqpgdiyhqtwaryfvkfldayaehklqfwavtaenepsa
    gllsgypfqclgftpehqrdfiardlgptlansthhnvrllmlddqrlllphwakvvltd
    peaakyvhgiavhwyldflapakatlgethrlfpntmlfaseacvgskfweqsvrlgswd
    rgmqyshsiitnllyhvvgwtdwnlalnpeggpnwvrnfvdspiivditkdtfykqpmfy
    hlghfskfipegsqrvglvasqkndldavalmhpdgsavvvvlnrsskdvpltikdpavg
    fletispgysihtylwhrqllvdtm
    

    Sequence, based on observed residues (ATOM records):
    >2xwdB (B:)
    farpcipksfgyssvvcvcnatycdsfalgtfsryestrsgrrmelsmgpiqanhtgtgl
    lltlqpeqkfqkvkgfggamtdaaalnilalsppaqnlllksyfseegigyniirvpmas
    cdfsirtytyadtpddfqlhnfslpeedtklkiplihralqlaqrpvsllaspwtsptwl
    ktngavngkgslkgqpgdiyhqtwaryfvkfldayaehklqfwavtaenepsagllsgyp
    fqclgftpehqrdfiardlgptlansthhnvrllmlddqrlllphwakvvltdpeaakyv
    hgiavhwyldflapakatlgethrlfpntmlfaseacvgskfweqsvrlgswdrgmqysh
    siitnllyhvvgwtdwnlalnpeggpnwvrnfvdspiivditkdtfykqpmfyhlghfsk
    fipegsqrvglvasqkndldavalmhpdgsavvvvlnrsskdvpltikdpavgfletisp
    gysihtylwhrq